RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 APAF1O14727 1248 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 BTDP43251 543 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 CCNA1P78396 465 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 PRAMEF19Q5SWL8 479 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 MFSD5Q6N075 450 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 ZNF365Q70YC5 407 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 ANKRD33Q7Z3H0 272 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 UIMC1Q96RL1 719 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
PCOLCE-202ENST00000460002 A0A1W2PQ45 241 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 A0A1W2PQY0 241 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 ACRP10323 421 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 CSF2RAP15509 400 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 RHBDL3P58872 404 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 OLFML2BQ68BL8 750 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 TBX21Q9UL17 535 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 COG5Q9UP83 839 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 IVNS1ABPQ9Y6Y0 642 aa16.91■□□□□ 0.3
PCOLCE-202ENST00000460002 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
PCOLCE-202ENST00000460002 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
PCOLCE-202ENST00000460002 CCDC174Q6PII3 467 aa16.9■□□□□ 0.3
PCOLCE-202ENST00000460002 TOX2Q96NM4 488 aa16.9■□□□□ 0.3
PCOLCE-202ENST00000460002 MTCH2Q9Y6C9 303 aa16.9■□□□□ 0.3
PCOLCE-202ENST00000460002 DCDC2CA8MYV0 355 aa16.89■□□□□ 0.29
PCOLCE-202ENST00000460002 SLC5A1P13866 664 aa16.89■□□□□ 0.29
PCOLCE-202ENST00000460002 FAM163AQ96GL9 167 aaPredicted RBP16.89■□□□□ 0.29
PCOLCE-202ENST00000460002 BTBD7Q9P203 1132 aa16.89■□□□□ 0.29
PCOLCE-202ENST00000460002 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
PCOLCE-202ENST00000460002 WDFY4Q6ZS81 3184 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 RFXAPO00287 272 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 ASNSP08243 561 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 POU3F3P20264 500 aaPredicted RBP16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 PSRC1Q6PGN9 363 aaPredicted RBP16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 DPP9Q86TI2 863 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 LPIN2Q92539 896 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 PHOX2BQ99453 314 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 KCNH6Q9H252 994 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 XPNPEP3Q9NQH7 507 aa16.88■□□□□ 0.29
PCOLCE-202ENST00000460002 PRRC2BQ5JSZ5 2229 aaKnown RBP16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 PGK1P00558 417 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 MYOGP15173 224 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 ADORA2AP29274 412 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 RABGGTBP53611 331 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 PPP2R2DQ66LE6 453 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 KRT40Q6A162 431 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 DZIP1Q86YF9 867 aaKnown RBP16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 CCER1Q8TC90 406 aaPredicted RBP16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
PCOLCE-202ENST00000460002 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 RALBP1Q15311 655 aa16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 RNF180Q86T96 592 aa16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 ANKRD44Q8N8A2 993 aa16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 HLA-CQ95604 372 aa16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 GBF1Q92538 1859 aa16.86■□□□□ 0.29
PCOLCE-202ENST00000460002 GPR75-ASB3A0A0A6YYF3 556 aa16.85■□□□□ 0.29
PCOLCE-202ENST00000460002 COBLO75128 1261 aa16.85■□□□□ 0.29
PCOLCE-202ENST00000460002 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
PCOLCE-202ENST00000460002 DENND2AQ9ULE3 1009 aa16.85■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L15C9J2P7 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L13C9JLJ4 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L11C9JVI0 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L18D6R9N7 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L22D6RA61 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L17D6RBQ6 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L19D6RCP7 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L20D6RJB6 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 ALDH1L1O75891 902 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 RARBP10826 455 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 PHKA1P46020 1223 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 FOXK2Q01167 660 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L24Q0WX57 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 USP17L2Q6R6M4 530 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 SLF2Q8IX21 1173 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 ZNF384Q8TF68 577 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 DNAJC18Q9H819 358 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 STARD7Q9NQZ5 370 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 ZNF236Q9UL36 1845 aa16.84■□□□□ 0.29
PCOLCE-202ENST00000460002 APBB1O00213 710 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 ST18O60284 1047 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 GDF11O95390 407 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 CSPP1Q1MSJ5 1256 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 ANKS1AQ92625 1134 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 ABCF2Q9UG63 623 aa16.83■□□□□ 0.28
PCOLCE-202ENST00000460002 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms