RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 FOSL2P15408 326 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 CD44P16070 742 aaKnown RBP9.68□□□□□ -0.86
HPS4-207ENST00000459918 RTP1P59025 263 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 OS9Q13438 667 aaPredicted RBP9.68□□□□□ -0.86
HPS4-207ENST00000459918 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 LHX8Q68G74 356 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
HPS4-207ENST00000459918 MEIS3Q99687 375 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 PALD1Q9ULE6 856 aa9.68□□□□□ -0.86
HPS4-207ENST00000459918 NOB1Q9ULX3 412 aaKnown RBP9.68□□□□□ -0.86
HPS4-207ENST00000459918 MYO5AQ9Y4I1 1855 aaKnown RBP9.68□□□□□ -0.86
HPS4-207ENST00000459918 USP17L15C9J2P7 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L13C9JLJ4 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L11C9JVI0 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L18D6R9N7 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L22D6RA61 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L17D6RBQ6 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L19D6RCP7 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L20D6RJB6 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 DNM1LO00429 736 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 GH2P01242 217 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 GNAI3P08754 354 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP5P45974 858 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 USP17L24Q0WX57 530 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 G3BP1Q13283 466 aaKnown RBP eCLIP9.67□□□□□ -0.86
HPS4-207ENST00000459918 SHROOM1Q2M3G4 852 aaPredicted RBP9.67□□□□□ -0.86
HPS4-207ENST00000459918 Q3C1V9 767 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 CCDC158Q5M9N0 1113 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 MORN1Q5T089 497 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 GJC2Q5T442 439 aaPredicted RBP9.67□□□□□ -0.86
HPS4-207ENST00000459918 DPP9Q86TI2 863 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 FOXP4Q8IVH2 680 aaPredicted RBP9.67□□□□□ -0.86
HPS4-207ENST00000459918 ZNF384Q8TF68 577 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 LPAR1Q92633 364 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 CDX2Q99626 313 aaPredicted RBP9.67□□□□□ -0.86
HPS4-207ENST00000459918 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 RABGAP1Q9Y3P9 1069 aa9.67□□□□□ -0.86
HPS4-207ENST00000459918 MYH8P13535 1937 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 RLFQ13129 1914 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 ZNF521Q96K83 1311 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 POTEB2H3BUK9 544 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 ARID4AP29374 1257 aaPredicted RBP9.66□□□□□ -0.86
HPS4-207ENST00000459918 CYP2C19P33261 490 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 MCAMP43121 646 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 USP14P54578 494 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 ANO1Q5XXA6 986 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 ARRDC4Q8NCT1 418 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 MYLIPQ8WY64 445 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 FLRT1Q9NZU1 646 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 NAV1Q8NEY1 1877 aa9.66□□□□□ -0.86
HPS4-207ENST00000459918 SLC15A5A6NIM6 579 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 PTPREP23469 700 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 JAG1P78504 1218 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 SHHQ15465 462 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 USP6NLQ92738 828 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
HPS4-207ENST00000459918 BADQ92934 168 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 TANGO6Q9C0B7 1094 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 DNAJC18Q9H819 358 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 CABP5Q9NP86 173 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 PRUNE2Q8WUY3 3088 aa9.65□□□□□ -0.86
HPS4-207ENST00000459918 ZNF236Q9UL36 1845 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 CDH23Q9H251 3354 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
HPS4-207ENST00000459918 MPHOSPH10O00566 681 aaKnown RBP9.64□□□□□ -0.87
HPS4-207ENST00000459918 IDH1O75874 414 aaKnown RBP9.64□□□□□ -0.87
HPS4-207ENST00000459918 VCAM1P19320 739 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 SLFN5Q08AF3 891 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 PLS1Q14651 629 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 ABCB5Q2M3G0 1257 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 TRIM60Q495X7 471 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 C9orf50Q5SZB4 431 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 FERMT2Q96AC1 680 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 RNPC3Q96LT9 517 aaKnown RBP9.64□□□□□ -0.87
HPS4-207ENST00000459918 SEMA6BQ9H3T3 888 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 RPAP3Q9H6T3 665 aaPredicted RBP9.64□□□□□ -0.87
HPS4-207ENST00000459918 PRDM6Q9NQX0 595 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 SLC5A4Q9NY91 659 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
HPS4-207ENST00000459918 GNAI2P04899 355 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 CYP7A1P22680 504 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 ADORA2AP29274 412 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 ADCYAP1R1P41586 468 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 DYNLL1P63167 89 aaKnown RBP9.63□□□□□ -0.87
HPS4-207ENST00000459918 GRB14Q14449 540 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 CERKLQ49MI3 558 aaPredicted RBP9.63□□□□□ -0.87
HPS4-207ENST00000459918 SLC39A5Q6ZMH5 540 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 ADGRA1Q86SQ6 560 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 NPLOC4Q8TAT6 608 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
HPS4-207ENST00000459918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.63□□□□□ -0.87
HPS4-207ENST00000459918 CNMDO75829 334 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 CYBAP13498 195 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 PPP4CP60510 307 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 SMAD3P84022 425 aaKnown RBP9.62□□□□□ -0.87
HPS4-207ENST00000459918 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms