RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 FAM43AQ8N2R8 423 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 ACER1Q8TDN7 264 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 FEZ1Q99689 392 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 WDR18Q9BV38 432 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-206ENST00000459895 BTBD19C9JJ37 291 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 ZNF213O14771 459 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 CYP21A2P08686 494 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 FGRP09769 529 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-206ENST00000459895 RRP12Q5JTH9 1297 aaKnown RBP15.21■□□□□ 0.03
COL18A1-206ENST00000459895 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 TREML2Q5T2D2 321 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 GADL1Q6ZQY3 521 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 MAP4K1Q92918 833 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 TOMM22Q9NS69 142 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 WBP1LQ9NX94 342 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 CTNNA3Q9UI47 895 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 TSKSQ9UJT2 592 aa15.21■□□□□ 0.03
COL18A1-206ENST00000459895 A0A1W2PRG0 241 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 CXCL11O14625 94 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 TSPY3P0CV98 308 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 TSPY8P0CW00 308 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 TM4SF4P48230 202 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 BACE1P56817 501 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 KIAA1211Q6ZU35 1233 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 STOX1Q6ZVD7 989 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 CEP95Q96GE4 821 aa15.2■□□□□ 0.02
COL18A1-206ENST00000459895 COL11A1P12107 1806 aaPredicted RBP15.2■□□□□ 0.02
COL18A1-206ENST00000459895 TSPY2A6NKD2 308 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 FOXN1O15353 648 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 RANBP6O60518 1105 aaKnown RBP15.19■□□□□ 0.02
COL18A1-206ENST00000459895 NMT2O60551 498 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 TFAP4Q01664 338 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 GPAT2Q6NUI2 795 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-206ENST00000459895 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 KIAA1683Q9H0B3 1180 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-206ENST00000459895 RNF186Q9NXI6 227 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 SAGE1Q9NXZ1 904 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 AGTPBP1Q9UPW5 1226 aa15.19■□□□□ 0.02
COL18A1-206ENST00000459895 B4E1Z4 1266 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 SLC27A2O14975 620 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
COL18A1-206ENST00000459895 EEF2P13639 858 aaKnown RBP15.18■□□□□ 0.02
COL18A1-206ENST00000459895 VCAM1P19320 739 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 ATP2B2Q01814 1243 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 ANKRD23Q86SG2 305 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-206ENST00000459895 LRRC47Q8N1G4 583 aaKnown RBP15.18■□□□□ 0.02
COL18A1-206ENST00000459895 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-206ENST00000459895 C12orf42Q96LP6 360 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 ARHGEF10LQ9HCE6 1279 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 MGAMO43451 1857 aa15.18■□□□□ 0.02
COL18A1-206ENST00000459895 ADGRA2Q96PE1 1338 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 PDHXO00330 501 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 KDM4AO75164 1064 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 TRPA1O75762 1119 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 CRHR2Q13324 411 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 KIAA1755Q5JYT7 1200 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 RASGRP2Q7LDG7 609 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 IL17RBQ9NRM6 502 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 MTMR4Q9NYA4 1195 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
COL18A1-206ENST00000459895 E7EWF7 191 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
COL18A1-206ENST00000459895 INHBEP58166 350 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 COL9A3Q14050 684 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-206ENST00000459895 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 TAF1CQ15572 869 aaPredicted RBP15.16■□□□□ 0.02
COL18A1-206ENST00000459895 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 FASTKD5Q7L8L6 764 aaKnown RBP15.16■□□□□ 0.02
COL18A1-206ENST00000459895 ESR2Q92731 530 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 BEGAINQ9BUH8 593 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 SH2D4AQ9H788 454 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 ZCCHC17Q9NP64 241 aaKnown RBP15.16■□□□□ 0.02
COL18A1-206ENST00000459895 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
COL18A1-206ENST00000459895 C19orf81C9J6K1 198 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 CA12O43570 354 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 REC8O95072 547 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 TTLL1O95922 423 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 CYP2C8P10632 490 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 USP14P54578 494 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 SPICE1Q8N0Z3 855 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 CFHR5Q9BXR6 569 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 VCPKMTQ9H867 229 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
COL18A1-206ENST00000459895 NYAP2Q9P242 653 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms