RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GTF3C6Q969F1 213 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 C8orf76Q96K31 380 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 MAP3K14Q99558 947 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 AGXT2Q9BYV1 514 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 AS3MTQ9HBK9 375 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 GOPCQ9HD26 462 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 ADARB2Q9NS39 739 aaKnown RBP6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 GINM1Q9NU53 330 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 ORC3Q9UBD5 711 aaPredicted RBP6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 HACL1Q9UJ83 578 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 CFAP45Q9UL16 551 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 CLEC11AQ9Y240 323 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 TIAM2Q8IVF5 1701 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 WNT10BO00744 389 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 PPP1R12BO60237 982 aaPredicted RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 WDHD1O75717 1129 aaPredicted RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 CD2BP2O95400 341 aaKnown RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 DEXIO95424 95 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 ASNSP08243 561 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 CYP2D6P10635 497 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 CACNB3P54284 484 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 EVCP57679 992 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZNF280AP59817 542 aaPredicted RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 RAB3GAP1Q15042 981 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 TBC1D10BQ4KMP7 808 aaPredicted RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 GPATCH4Q5T3I0 446 aaKnown RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 CYB5R4Q7L1T6 521 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 CCDC144CPQ8IYA2 1237 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 PNMA1Q8ND90 353 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 RGS22Q8NE09 1264 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 RRP36Q96EU6 259 aaKnown RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDX11Q96FC9 970 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 DYNLL2Q96FJ2 89 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZNF396Q96N95 335 aaPredicted RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 GMLQ99445 158 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 FEZ1Q99689 392 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 LY9Q9HBG7 655 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 PICK1Q9NRD5 415 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 GPRC5DQ9NZD1 345 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 CLIP2Q9UDT6 1046 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 MTMR7Q9Y216 660 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 ROBO3Q96MS0 1386 aa6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 POLR2AP24928 1970 aaKnown RBP6.77□□□□□ -1.33
RNU1-88P-201ENST00000459274 PTPDC1A2A3K4 754 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 FOXP2O15409 715 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 TBC1D12O60347 775 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZSCAN22P10073 491 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 RASA1P20936 1047 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 KRT85P78386 507 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 SCRN1Q12765 414 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 TTLL12Q14166 644 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 CCDC96Q2M329 555 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 ASPRV1Q53RT3 343 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 ATL3Q6DD88 541 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 USP50Q70EL3 339 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 SLC51AQ86UW1 340 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 REM2Q8IYK8 340 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 ENAHQ8N8S7 591 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 CCDC148Q8NFR7 591 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 SYAP1Q96A49 352 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 SLC26A6Q9BXS9 759 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZNF341Q9BYN7 854 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 MKRN1Q9UHC7 482 aaKnown RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 COL2A1P02458 1487 aaPredicted RBP6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 SCN4AP35499 1836 aa6.76□□□□□ -1.33
RNU1-88P-201ENST00000459274 EP400Q96L91 3159 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 GLTPD2A6NH11 291 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 hCG_1984214I3L0E3 225 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 CTNND1O60716 968 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDNO94850 711 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 IFNAR1P17181 557 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SYT1P21579 422 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 CALML3P27482 149 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SMARCA1P28370 1054 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SLC1A4P43007 532 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 IREB2P48200 963 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 ANTXR2P58335 489 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 NLRP5P59047 1200 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 ICA1Q05084 483 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 RASA3Q14644 834 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SF3A1Q15459 793 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 NBPF9Q3BBW0 867 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 EAPPQ56P03 285 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 FOXD4L5Q5VV16 416 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SAMD7Q7Z3H4 446 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 FAM177A1Q8N128 213 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 CCDC82Q8N4S0 544 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZNF713Q8N859 430 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 BICD2Q8TD16 824 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZC3H15Q8WU90 426 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 CHURC1Q8WUH1 139 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 FOXD4L4Q8WXT5 416 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 CCDC34Q96HJ3 373 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 ALG1Q9BT22 464 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 RNF26Q9BY78 433 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SCAND2PQ9GZW5 306 aaPredicted RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 GLT8D2Q9H1C3 349 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms