RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SAT1P21673 171 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 GOLGA8FQ08AF8 430 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 GOLGA8DPQ0D2H9 430 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 SFMBT2Q5VUG0 894 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 SWAP70Q9UH65 585 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 PCDHB13Q9Y5F0 798 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 FLT4P35916 1363 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 SH2D4BQ5SQS7 431 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
SNX27-204ENST00000458013 NFE2L3Q9Y4A8 694 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 CETN3O15182 167 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 METTL13Q8N6R0 699 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 CCDC89Q8N998 374 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 EYA2O00167 538 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 HAUS3Q68CZ6 603 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 TRIM68Q6AZZ1 485 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 SCYL2Q6P3W7 929 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 CSRNP2Q9H175 543 aa21.8■■□□□ 1.08
SNX27-204ENST00000458013 SLC9C1Q4G0N8 1177 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 SPATA5Q8NB90 893 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 SYNJ2BP-COX16A0A087WUM0 186 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 KRT40Q6A162 431 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 NXNQ6DKJ4 435 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 COX16Q9P0S2 106 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 CUTAO60888 179 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 TECP42680 631 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 VWA3BQ502W6 1294 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 CCDC62Q6P9F0 684 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 C2CD5Q86YS7 1000 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 MED10Q9BTT4 135 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
SNX27-204ENST00000458013 DNM3Q9UQ16 869 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 RNF169Q8NCN4 708 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 DCAF5Q96JK2 942 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 FAM184BQ9ULE4 1060 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 STK10O94804 968 aaKnown RBP21.79■■□□□ 1.08
SNX27-204ENST00000458013 GCP02774 474 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 TNNI1P19237 187 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 GPHNQ9NQX3 736 aaPredicted RBP21.79■■□□□ 1.08
SNX27-204ENST00000458013 ST7Q9NRC1 585 aa21.79■■□□□ 1.08
SNX27-204ENST00000458013 FEZ2Q9UHY8 353 aaPredicted RBP21.79■■□□□ 1.08
SNX27-204ENST00000458013 ATP1A2P50993 1020 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 PEX26Q7Z412 305 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 GOLGA8HP0CJ92 632 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 MAGEA1P43355 309 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 SLC1A4P43007 532 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 SESTD1Q86VW0 696 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 CUL7Q14999 1698 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 CACNA2D3Q8IZS8 1091 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 MAGED2Q9UNF1 606 aaPredicted RBP21.78■■□□□ 1.08
SNX27-204ENST00000458013 TRIM14Q14142 442 aa21.78■■□□□ 1.08
SNX27-204ENST00000458013 CUL4BQ13620 913 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 PLBD2Q8NHP8 589 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 RAD50Q92878 1312 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 KAZNQ674X7 775 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 B4GALNT4Q76KP1 1039 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 FRMD3A2A2Y4 597 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 TMEM87BQ96K49 555 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 XPO4Q9C0E2 1151 aaKnown RBP21.77■■□□□ 1.08
SNX27-204ENST00000458013 DPH5Q9H2P9 285 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 TUBB4AP04350 444 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 EXOC7Q9UPT5 735 aa21.77■■□□□ 1.08
SNX27-204ENST00000458013 SESN3P58005 492 aa21.77■■□□□ 1.07
SNX27-204ENST00000458013 WDR66Q8TBY9 1149 aa21.77■■□□□ 1.07
SNX27-204ENST00000458013 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
SNX27-204ENST00000458013 ITKQ08881 620 aa21.76■■□□□ 1.07
SNX27-204ENST00000458013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.76■■□□□ 1.07
SNX27-204ENST00000458013 EEF2KMTQ96G04 330 aa21.76■■□□□ 1.07
SNX27-204ENST00000458013 NONOQ15233 471 aaKnown RBP eCLIP21.76■■□□□ 1.07
SNX27-204ENST00000458013 GPKOWQ92917 476 aaPredicted RBP eCLIP21.76■■□□□ 1.07
SNX27-204ENST00000458013 E7EWF7 191 aa21.76■■□□□ 1.07
SNX27-204ENST00000458013 I3L4J1 428 aa21.76■■□□□ 1.07
SNX27-204ENST00000458013 RPS6KA1Q15418 735 aa21.76■■□□□ 1.07
SNX27-204ENST00000458013 CASQ2O14958 399 aaPredicted RBP21.75■■□□□ 1.07
SNX27-204ENST00000458013 DENND2CQ68D51 928 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 NOP9Q86U38 636 aaKnown RBP21.75■■□□□ 1.07
SNX27-204ENST00000458013 CTAGE3PQ8IX95 158 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 PDE8AO60658 829 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 DCLK2Q8N568 766 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 NAP1L4Q99733 375 aaKnown RBP21.75■■□□□ 1.07
SNX27-204ENST00000458013 NUF2Q9BZD4 464 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 ME3Q16798 604 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 EAPPQ56P03 285 aaPredicted RBP21.75■■□□□ 1.07
SNX27-204ENST00000458013 NR1I2O75469 434 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 TFAP4Q01664 338 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 PPP2R5AQ15172 486 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 DPP8Q6V1X1 898 aaPredicted RBP21.75■■□□□ 1.07
SNX27-204ENST00000458013 TAOK1Q7L7X3 1001 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 PAGR1Q9BTK6 254 aa21.75■■□□□ 1.07
SNX27-204ENST00000458013 C4orf50Q6ZRC1 276 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 GBP7Q8N8V2 638 aaPredicted RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 SDR42E1Q8WUS8 393 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 APPBP2Q92624 585 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 DDX27Q96GQ7 796 aaKnown RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 IFIH1Q9BYX4 1025 aaKnown RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 TESPA1A2RU30 521 aaPredicted RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 EP400NLQ6ZTU2 488 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 LMNTD2Q8IXW0 634 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 CLIC6Q96NY7 704 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms