RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
TCF4-204ENST00000457482 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 WASF1Q92558 559 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
TCF4-204ENST00000457482 PDLIM2Q96JY6 352 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 RRAGDQ9NQL2 400 aaPredicted RBP13.17□□□□□ -0.3
TCF4-204ENST00000457482 A0A087WWV3 80 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 IGSF3O75054 1194 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
TCF4-204ENST00000457482 NDUFA8P51970 172 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
TCF4-204ENST00000457482 RNF26Q9BY78 433 aaPredicted RBP13.17□□□□□ -0.3
TCF4-204ENST00000457482 TTF2Q9UNY4 1162 aaKnown RBP13.17□□□□□ -0.3
TCF4-204ENST00000457482 H0YIN7 160 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 GABBR2O75899 941 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 DDAH1O94760 285 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 RASA1P20936 1047 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
TCF4-204ENST00000457482 PICALMQ13492 652 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 PTPAQ15257 358 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
TCF4-204ENST00000457482 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 MRPS27Q92552 414 aaKnown RBP13.16□□□□□ -0.3
TCF4-204ENST00000457482 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
TCF4-204ENST00000457482 STK32BQ9NY57 414 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 SNED1Q8TER0 1413 aa13.16□□□□□ -0.3
TCF4-204ENST00000457482 PRPF3O43395 683 aaKnown RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 CALM1P0DP23 149 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 CALM2P0DP24 149 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 CALM3P0DP25 149 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 CDK8P49336 464 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 PPP2R5BQ15173 497 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 TRIM44Q96DX7 344 aaPredicted RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 PCDHAC2Q9Y5I4 1007 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 QSER1Q2KHR3 1735 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 G3V3G9 751 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 AP5Z1O43299 807 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 PLCG2P16885 1265 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
TCF4-204ENST00000457482 CLIC6Q96NY7 704 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
TCF4-204ENST00000457482 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
TCF4-204ENST00000457482 STYK1Q6J9G0 422 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 SLF2Q8IX21 1173 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
TCF4-204ENST00000457482 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
TCF4-204ENST00000457482 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
TCF4-204ENST00000457482 FOXP1Q9H334 677 aaPredicted RBP13.14□□□□□ -0.31
TCF4-204ENST00000457482 NPY5RQ15761 445 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 EYA3Q99504 573 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 PHF20Q9BVI0 1012 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 CABP5Q9NP86 173 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 UTRNP46939 3433 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
TCF4-204ENST00000457482 PFKFB1P16118 471 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 UVSSAQ2YD98 709 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 LHX8Q68G74 356 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 FAM43AQ8N2R8 423 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
TCF4-204ENST00000457482 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms