RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 AS3MTQ9HBK9 375 aa20.36■□□□□ 0.85
SF3B4-202ENST00000457312 TMOD4Q9NZQ9 345 aa20.36■□□□□ 0.85
SF3B4-202ENST00000457312 TBX21Q9UL17 535 aa20.36■□□□□ 0.85
SF3B4-202ENST00000457312 GAKO14976 1311 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 FLIIQ13045 1269 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 WDR78Q5VTH9 848 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 PSRC1Q6PGN9 363 aaPredicted RBP20.35■□□□□ 0.85
SF3B4-202ENST00000457312 ZNF365Q70YC5 407 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 ANKRD33Q7Z3H0 272 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 WDR18Q9BV38 432 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 CACNA1GO43497 2377 aa20.35■□□□□ 0.85
SF3B4-202ENST00000457312 A0A1W2PQ45 241 aaPredicted RBP20.34■□□□□ 0.85
SF3B4-202ENST00000457312 A0A1W2PQY0 241 aa20.34■□□□□ 0.85
SF3B4-202ENST00000457312 POU3F3P20264 500 aaPredicted RBP20.34■□□□□ 0.85
SF3B4-202ENST00000457312 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
SF3B4-202ENST00000457312 METTL24Q5JXM2 366 aa20.34■□□□□ 0.85
SF3B4-202ENST00000457312 PPP2R2DQ66LE6 453 aa20.34■□□□□ 0.85
SF3B4-202ENST00000457312 ZNF521Q96K83 1311 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 PDE8BO95263 885 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 LDHBP07195 334 aaKnown RBP20.33■□□□□ 0.85
SF3B4-202ENST00000457312 ACRP10323 421 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 CSF2RAP15509 400 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 OLFML2BQ68BL8 750 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 HLA-CQ95604 372 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 TOX2Q96NM4 488 aa20.33■□□□□ 0.85
SF3B4-202ENST00000457312 CCNA1P78396 465 aa20.32■□□□□ 0.84
SF3B4-202ENST00000457312 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
SF3B4-202ENST00000457312 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
SF3B4-202ENST00000457312 RABGAP1Q9Y3P9 1069 aa20.32■□□□□ 0.84
SF3B4-202ENST00000457312 PTPRZ1P23471 2315 aaPredicted RBP20.31■□□□□ 0.84
SF3B4-202ENST00000457312 KRT40Q6A162 431 aa20.31■□□□□ 0.84
SF3B4-202ENST00000457312 IVNS1ABPQ9Y6Y0 642 aa20.31■□□□□ 0.84
SF3B4-202ENST00000457312 COL4A4P53420 1690 aaPredicted RBP20.31■□□□□ 0.84
SF3B4-202ENST00000457312 CACNA1HO95180 2353 aa20.3■□□□□ 0.84
SF3B4-202ENST00000457312 DCDC2CA8MYV0 355 aa20.3■□□□□ 0.84
SF3B4-202ENST00000457312 RFXAPO00287 272 aa20.3■□□□□ 0.84
SF3B4-202ENST00000457312 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
SF3B4-202ENST00000457312 FGFR2P21802 821 aa20.3■□□□□ 0.84
SF3B4-202ENST00000457312 RABGGTBP53611 331 aa20.3■□□□□ 0.84
SF3B4-202ENST00000457312 ANKS1AQ92625 1134 aa20.3■□□□□ 0.84
SF3B4-202ENST00000457312 SALL1Q9NSC2 1324 aa20.29■□□□□ 0.84
SF3B4-202ENST00000457312 GRM8O00222 908 aa20.29■□□□□ 0.84
SF3B4-202ENST00000457312 SLC5A1P13866 664 aa20.29■□□□□ 0.84
SF3B4-202ENST00000457312 MYOGP15173 224 aa20.29■□□□□ 0.84
SF3B4-202ENST00000457312 GJD3Q8N144 294 aa20.29■□□□□ 0.84
SF3B4-202ENST00000457312 XPNPEP3Q9NQH7 507 aa20.29■□□□□ 0.84
SF3B4-202ENST00000457312 ZFHX2Q9C0A1 2572 aaPredicted RBP20.29■□□□□ 0.84
SF3B4-202ENST00000457312 DCHS1Q96JQ0 3298 aa20.28■□□□□ 0.84
SF3B4-202ENST00000457312 C19orf81C9J6K1 198 aa20.28■□□□□ 0.84
SF3B4-202ENST00000457312 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
SF3B4-202ENST00000457312 ALADP13716 330 aa20.28■□□□□ 0.84
SF3B4-202ENST00000457312 PRAMEF19Q5SWL8 479 aa20.28■□□□□ 0.84
SF3B4-202ENST00000457312 BEND3Q5T5X7 828 aa20.28■□□□□ 0.84
SF3B4-202ENST00000457312 EPOPA6NHQ4 379 aa20.27■□□□□ 0.84
SF3B4-202ENST00000457312 PUM3Q15397 648 aaKnown RBP20.27■□□□□ 0.84
SF3B4-202ENST00000457312 TMEM199Q8N511 208 aa20.27■□□□□ 0.84
SF3B4-202ENST00000457312 APBB1O00213 710 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 PGK1P00558 417 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 BTDP43251 543 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 JAG1P78504 1218 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 RNF180Q86T96 592 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 FAM178BQ8IXR5 827 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 MTIF3Q9H2K0 278 aaKnown RBP20.26■□□□□ 0.83
SF3B4-202ENST00000457312 TRIOO75962 3097 aa20.26■□□□□ 0.83
SF3B4-202ENST00000457312 ROBO3Q96MS0 1386 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 ADORA2AP29274 412 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 CALD1Q05682 793 aaKnown RBP20.25■□□□□ 0.83
SF3B4-202ENST00000457312 SHROOM1Q2M3G4 852 aaPredicted RBP20.25■□□□□ 0.83
SF3B4-202ENST00000457312 DPP9Q86TI2 863 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 IL23AQ9NPF7 189 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 STARD7Q9NQZ5 370 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 EMILIN3Q9NT22 766 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 PCDHA11Q9Y5I1 949 aa20.25■□□□□ 0.83
SF3B4-202ENST00000457312 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
SF3B4-202ENST00000457312 NPM3O75607 178 aaKnown RBP20.24■□□□□ 0.83
SF3B4-202ENST00000457312 RARBP10826 455 aa20.24■□□□□ 0.83
SF3B4-202ENST00000457312 RHBDL3P58872 404 aa20.24■□□□□ 0.83
SF3B4-202ENST00000457312 SUCLG2Q96I99 432 aa20.24■□□□□ 0.83
SF3B4-202ENST00000457312 PPP1R12CQ9BZL4 782 aa20.24■□□□□ 0.83
SF3B4-202ENST00000457312 EPG5Q9HCE0 2579 aa20.24■□□□□ 0.83
SF3B4-202ENST00000457312 F6X3S4 739 aa20.23■□□□□ 0.83
SF3B4-202ENST00000457312 ASNSP08243 561 aa20.23■□□□□ 0.83
SF3B4-202ENST00000457312 PRSS33Q8NF86 280 aa20.23■□□□□ 0.83
SF3B4-202ENST00000457312 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
SF3B4-202ENST00000457312 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
SF3B4-202ENST00000457312 COBLO75128 1261 aa20.22■□□□□ 0.83
SF3B4-202ENST00000457312 SSTR3P32745 418 aaPredicted RBP20.22■□□□□ 0.83
SF3B4-202ENST00000457312 HFE2Q6ZVN8 426 aa20.22■□□□□ 0.83
SF3B4-202ENST00000457312 HERC5Q9UII4 1024 aaKnown RBP20.22■□□□□ 0.83
SF3B4-202ENST00000457312 RIF1Q5UIP0 2472 aaKnown RBP20.22■□□□□ 0.83
SF3B4-202ENST00000457312 TECTAO75443 2155 aa20.22■□□□□ 0.83
SF3B4-202ENST00000457312 FAM186AA6NE01 2351 aa20.21■□□□□ 0.83
SF3B4-202ENST00000457312 DCXO43602 365 aa20.21■□□□□ 0.83
SF3B4-202ENST00000457312 LBX2Q6XYB7 198 aa20.21■□□□□ 0.83
SF3B4-202ENST00000457312 OTOP2Q7RTS6 562 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms