RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 PHIPQ8WWQ0 1821 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 HSPD1P10809 573 aaKnown RBP14.63□□□□□ -0.07
C9orf139-201ENST00000457302 JAG1P78504 1218 aa14.63□□□□□ -0.07
C9orf139-201ENST00000457302 ATP2B2Q01814 1243 aa14.63□□□□□ -0.07
C9orf139-201ENST00000457302 PPARAQ07869 468 aa14.63□□□□□ -0.07
C9orf139-201ENST00000457302 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
C9orf139-201ENST00000457302 EPB41L4AQ9HCS5 686 aaPredicted RBP14.63□□□□□ -0.07
C9orf139-201ENST00000457302 CAPN15O75808 1086 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 FGAP02671 866 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 AKR1B1P15121 316 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
C9orf139-201ENST00000457302 DGKZQ13574 1117 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 ZYXQ15942 572 aaKnown RBP14.62□□□□□ -0.07
C9orf139-201ENST00000457302 GPAT2Q6NUI2 795 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 R3HDMLQ9H3Y0 253 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 TOMM22Q9NS69 142 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 PTPRFP10586 1907 aa14.62□□□□□ -0.07
C9orf139-201ENST00000457302 ZNF213O14771 459 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 TSPY3P0CV98 308 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 TSPY8P0CW00 308 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
C9orf139-201ENST00000457302 EVX2Q03828 476 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 ICA1Q05084 483 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 MOGSQ13724 837 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 PKN2Q16513 984 aaKnown RBP14.61□□□□□ -0.07
C9orf139-201ENST00000457302 PPP4R3BQ5MIZ7 849 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 VPS53Q5VIR6 699 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 CASC1Q6TDU7 716 aa14.61□□□□□ -0.07
C9orf139-201ENST00000457302 CTU1Q7Z7A3 348 aaKnown RBP14.61□□□□□ -0.07
C9orf139-201ENST00000457302 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L15C9J2P7 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L13C9JLJ4 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L11C9JVI0 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L18D6R9N7 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L22D6RA61 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L17D6RBQ6 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L19D6RCP7 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L20D6RJB6 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 RAD21O60216 631 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 PRDM1O75626 825 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 CYP2C8P10632 490 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 GCLCP48506 637 aaPredicted RBP14.6□□□□□ -0.07
C9orf139-201ENST00000457302 CTDSPL2Q05D32 466 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 USP17L24Q0WX57 530 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 SHROOM1Q2M3G4 852 aaPredicted RBP14.6□□□□□ -0.07
C9orf139-201ENST00000457302 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 KIAA1211Q6ZU35 1233 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 KIAA1683Q9H0B3 1180 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 EFCC1Q9HA90 598 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
C9orf139-201ENST00000457302 TSPY2A6NKD2 308 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 RANBP6O60518 1105 aaKnown RBP14.59□□□□□ -0.07
C9orf139-201ENST00000457302 CHMLP26374 656 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 HOXD10P28358 340 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 HOXA7P31268 230 aaPredicted RBP14.59□□□□□ -0.07
C9orf139-201ENST00000457302 GUCY1A2P33402 732 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 TFAP4Q01664 338 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 C17orf99Q6UX52 265 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 MFSD6Q6ZSS7 791 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 ZNF589Q86UQ0 364 aaPredicted RBP14.59□□□□□ -0.07
C9orf139-201ENST00000457302 ACER1Q8TDN7 264 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 GTF3C2Q8WUA4 911 aaPredicted RBP14.59□□□□□ -0.07
C9orf139-201ENST00000457302 DSCC1Q9BVC3 393 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 RNF41Q9H4P4 317 aaPredicted RBP14.59□□□□□ -0.07
C9orf139-201ENST00000457302 GOPCQ9HD26 462 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 EMILIN3Q9NT22 766 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 ANAPC4Q9UJX5 808 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 RAD50Q92878 1312 aa14.59□□□□□ -0.07
C9orf139-201ENST00000457302 SMIM22K7EJ46 135 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 FMNL1O95466 1100 aaPredicted RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 PCP11498 1178 aaKnown RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 EEF2P13639 858 aaKnown RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 RASA1P20936 1047 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 IMMTQ16891 758 aaKnown RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 RRP12Q5JTH9 1297 aaKnown RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 CCAR1Q8IX12 1150 aaKnown RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 CD99L2Q8TCZ2 262 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 C12orf42Q96LP6 360 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 ASCC2Q9H1I8 757 aaPredicted RBP14.58□□□□□ -0.08
C9orf139-201ENST00000457302 TMX2Q9Y320 296 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 ZMYM6O95789 1325 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 ROBO3Q96MS0 1386 aa14.58□□□□□ -0.08
C9orf139-201ENST00000457302 GNRH1P01148 92 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 HAND2P61296 217 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 BMP2KLQ5H9B9 411 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 NEDD1Q8NHV4 660 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 LPAR1Q92633 364 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
C9orf139-201ENST00000457302 MCOLN1Q9GZU1 580 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 HOXC10Q9NYD6 342 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 NYAP2Q9P242 653 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 CLIP2Q9UDT6 1046 aa14.57□□□□□ -0.08
C9orf139-201ENST00000457302 TTLL1O95922 423 aa14.56□□□□□ -0.08
C9orf139-201ENST00000457302 NT5C2P49902 561 aa14.56□□□□□ -0.08
C9orf139-201ENST00000457302 LACTBP83111 547 aaPredicted RBP14.56□□□□□ -0.08
C9orf139-201ENST00000457302 FAM47AQ5JRC9 791 aa14.56□□□□□ -0.08
C9orf139-201ENST00000457302 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
C9orf139-201ENST00000457302 CATSPERGQ6ZRH7 1159 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms