RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 HOXC10Q9NYD6 342 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
PKP4-207ENST00000457109 HTTP42858 3142 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
PKP4-207ENST00000457109 PDE6AP16499 860 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 JAG1P78504 1218 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 ATP2B2Q01814 1243 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 Q3C1V9 767 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 CATSPERGQ6ZRH7 1159 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 GPR142Q7Z601 462 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 C12orf42Q96LP6 360 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 C11orf49Q9H6J7 331 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 SH2D4AQ9H788 454 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 TXNRD2Q9NNW7 524 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 SWAP70Q9UH65 585 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 COG6Q9Y2V7 657 aa10.65□□□□□ -0.7
PKP4-207ENST00000457109 ZNF532Q9HCE3 1301 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 A0A1W2PPC1 479 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 CNGA1P29973 690 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 PLCD1P51178 756 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 MAP2K5Q13163 448 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 COG2Q14746 738 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 DPP9Q86TI2 863 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 TRIB2Q92519 343 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 APBA2Q99767 749 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
PKP4-207ENST00000457109 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 BOLA2Q9H3K6 86 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 RPAP3Q9H6T3 665 aaPredicted RBP10.64□□□□□ -0.71
PKP4-207ENST00000457109 ARHGEF10LQ9HCE6 1279 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 ATP8A2Q9NTI2 1148 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 PAG1Q9NWQ8 432 aa10.64□□□□□ -0.71
PKP4-207ENST00000457109 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 SLC15A5A6NIM6 579 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 STRNO43815 780 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 VCAM1P19320 739 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 CACNB2Q08289 660 aaPredicted RBP10.63□□□□□ -0.71
PKP4-207ENST00000457109 TRIM32Q13049 653 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 SEPT2Q15019 361 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 SHROOM1Q2M3G4 852 aaPredicted RBP10.63□□□□□ -0.71
PKP4-207ENST00000457109 TMEM179Q6ZVK1 233 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 C7orf61Q8IZ16 206 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 ACER1Q8TDN7 264 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 GPATCH3Q96I76 525 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 CCDC17Q96LX7 622 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 PORCNQ9H237 461 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 ZBTB40Q9NUA8 1239 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 OGDHLQ9ULD0 1010 aa10.63□□□□□ -0.71
PKP4-207ENST00000457109 CENPFP49454 3210 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 RAD21O60216 631 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 MSCO60682 206 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 PEX10O60683 326 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 ATP5JP18859 108 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 PTPREP23469 700 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 SHMT1P34896 483 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 PLS1Q14651 629 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 MORN1Q5T089 497 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
PKP4-207ENST00000457109 DIS3LQ8TF46 1054 aaKnown RBP10.62□□□□□ -0.71
PKP4-207ENST00000457109 SDR42E1Q8WUS8 393 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 ARMT1Q9H993 441 aa10.62□□□□□ -0.71
PKP4-207ENST00000457109 DCP1AQ9NPI6 582 aaPredicted RBP10.62□□□□□ -0.71
PKP4-207ENST00000457109 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
PKP4-207ENST00000457109 DOCK1Q14185 1865 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 MBD4O95243 580 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 LRRFIP1Q32MZ4 808 aaKnown RBP10.61□□□□□ -0.71
PKP4-207ENST00000457109 MAP3K21Q5TCX8 1036 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 LBX2Q6XYB7 198 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 LCORLQ8N3X6 602 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 MB21D1Q8N884 522 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 LPAR1Q92633 364 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 ZMYND8Q9ULU4 1186 aaPredicted RBP10.61□□□□□ -0.71
PKP4-207ENST00000457109 SLC4A4Q9Y6R1 1079 aa10.61□□□□□ -0.71
PKP4-207ENST00000457109 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
PKP4-207ENST00000457109 FLOT1O75955 427 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 CCND3P30281 292 aaPredicted RBP10.6□□□□□ -0.71
PKP4-207ENST00000457109 ADD2P35612 726 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 ICA1Q05084 483 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 GABPAQ06546 454 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 UBE3CQ15386 1083 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 CCL14Q16627 93 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 NCAPG2Q86XI2 1143 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 ARRDC4Q8NCT1 418 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 USP6NLQ92738 828 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 HAUS7Q99871 368 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 LBHD1Q9BQE6 289 aaPredicted RBP10.6□□□□□ -0.71
PKP4-207ENST00000457109 MROH8Q9H579 483 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 KANSL2Q9H9L4 492 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 MKNK2Q9HBH9 465 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 ZNF287Q9HBT7 754 aa10.6□□□□□ -0.71
PKP4-207ENST00000457109 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
PKP4-207ENST00000457109 CTDP1Q9Y5B0 961 aaPredicted RBP10.6□□□□□ -0.71
PKP4-207ENST00000457109 ZSWIM8A7E2V4 1837 aa10.59□□□□□ -0.71
PKP4-207ENST00000457109 TCRBV5S4A2TA0A5A2 114 aa10.59□□□□□ -0.71
PKP4-207ENST00000457109 SPDYE16A6NNV3 312 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms