RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 KIAA1683Q9H0B3 1180 aa27.67■■■□□ 2.02
CBX3-204ENST00000456948 SH2D4AQ9H788 454 aa27.67■■■□□ 2.02
CBX3-204ENST00000456948 HIP1O00291 1037 aa27.66■■■□□ 2.02
CBX3-204ENST00000456948 HOXA7P31268 230 aaPredicted RBP27.66■■■□□ 2.02
CBX3-204ENST00000456948 MFAP1P55081 439 aaKnown RBP27.66■■■□□ 2.02
CBX3-204ENST00000456948 SEPT2Q15019 361 aa27.66■■■□□ 2.02
CBX3-204ENST00000456948 MCMDC2Q4G0Z9 681 aa27.66■■■□□ 2.02
CBX3-204ENST00000456948 SLC44A5Q8NCS7 719 aa27.66■■■□□ 2.02
CBX3-204ENST00000456948 ARHGEF10LQ9HCE6 1279 aa27.66■■■□□ 2.02
CBX3-204ENST00000456948 MYH8P13535 1937 aa27.65■■■□□ 2.02
CBX3-204ENST00000456948 PRMT2P55345 433 aa27.65■■■□□ 2.02
CBX3-204ENST00000456948 MLLT1Q03111 559 aaPredicted RBP27.65■■■□□ 2.02
CBX3-204ENST00000456948 SHROOM1Q2M3G4 852 aaPredicted RBP27.65■■■□□ 2.02
CBX3-204ENST00000456948 PTPN22Q9Y2R2 807 aa27.65■■■□□ 2.02
CBX3-204ENST00000456948 ADGRA2Q96PE1 1338 aa27.65■■■□□ 2.02
CBX3-204ENST00000456948 FMNL1O95466 1100 aaPredicted RBP27.64■■■□□ 2.02
CBX3-204ENST00000456948 BCRP11274 1271 aa27.64■■■□□ 2.02
CBX3-204ENST00000456948 RGS19P49795 217 aa27.64■■■□□ 2.02
CBX3-204ENST00000456948 FCGRTP55899 365 aa27.64■■■□□ 2.02
CBX3-204ENST00000456948 ZNF444Q8N0Y2 327 aaPredicted RBP27.64■■■□□ 2.02
CBX3-204ENST00000456948 GTF3C2Q8WUA4 911 aaPredicted RBP27.64■■■□□ 2.02
CBX3-204ENST00000456948 ASCC2Q9H1I8 757 aaPredicted RBP27.64■■■□□ 2.02
CBX3-204ENST00000456948 PSMC4P43686 418 aa27.63■■■□□ 2.01
CBX3-204ENST00000456948 EVX2Q03828 476 aa27.63■■■□□ 2.01
CBX3-204ENST00000456948 PDE4BQ07343 736 aa27.63■■■□□ 2.01
CBX3-204ENST00000456948 C12orf42Q96LP6 360 aa27.63■■■□□ 2.01
CBX3-204ENST00000456948 KANSL2Q9H9L4 492 aa27.63■■■□□ 2.01
CBX3-204ENST00000456948 EMILIN3Q9NT22 766 aa27.63■■■□□ 2.01
CBX3-204ENST00000456948 ZYXQ15942 572 aaKnown RBP27.62■■■□□ 2.01
CBX3-204ENST00000456948 LOC285556D6RIA3 1793 aa27.62■■■□□ 2.01
CBX3-204ENST00000456948 USP17L15C9J2P7 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L13C9JLJ4 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L11C9JVI0 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L18D6R9N7 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L22D6RA61 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L17D6RBQ6 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L19D6RCP7 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L20D6RJB6 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 AKR1B1P15121 316 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 ICA1Q05084 483 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 USP17L24Q0WX57 530 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 FAM110CQ1W6H9 321 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 ANKRD13CQ8N6S4 541 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 EPB41L4AQ9HCS5 686 aaPredicted RBP27.61■■■□□ 2.01
CBX3-204ENST00000456948 DIAPH3Q9NSV4 1193 aa27.61■■■□□ 2.01
CBX3-204ENST00000456948 SDSP20132 328 aa27.6■■■□□ 2.01
CBX3-204ENST00000456948 GUCY1A2P33402 732 aa27.6■■■□□ 2.01
CBX3-204ENST00000456948 NBPF11Q86T75 865 aa27.6■■■□□ 2.01
CBX3-204ENST00000456948 ACER1Q8TDN7 264 aa27.6■■■□□ 2.01
CBX3-204ENST00000456948 ROBO3Q96MS0 1386 aa27.59■■■□□ 2.01
CBX3-204ENST00000456948 PPARAQ07869 468 aa27.58■■■□□ 2.01
CBX3-204ENST00000456948 NMIQ13287 307 aaPredicted RBP27.58■■■□□ 2.01
CBX3-204ENST00000456948 CCDC129Q6ZRS4 1044 aa27.58■■■□□ 2.01
CBX3-204ENST00000456948 STK11IPQ8N1F8 1099 aa27.58■■■□□ 2.01
CBX3-204ENST00000456948 LPAR1Q92633 364 aa27.58■■■□□ 2.01
CBX3-204ENST00000456948 FAM227BQ96M60 508 aa27.58■■■□□ 2.01
CBX3-204ENST00000456948 ECM2O94769 699 aaPredicted RBP27.57■■■□□ 2
CBX3-204ENST00000456948 HERVK_113P62684 666 aa27.57■■■□□ 2
CBX3-204ENST00000456948 CAP1Q01518 475 aa27.57■■■□□ 2
CBX3-204ENST00000456948 ATP2B2Q01814 1243 aa27.57■■■□□ 2
CBX3-204ENST00000456948 ALX1Q15699 326 aa27.57■■■□□ 2
CBX3-204ENST00000456948 CCAR1Q8IX12 1150 aaKnown RBP27.57■■■□□ 2
CBX3-204ENST00000456948 P2RX7Q99572 595 aaKnown RBP27.57■■■□□ 2
CBX3-204ENST00000456948 ARHGAP39Q9C0H5 1083 aa27.57■■■□□ 2
CBX3-204ENST00000456948 A0A0D9SFI3 127 aa27.56■■■□□ 2
CBX3-204ENST00000456948 TNPO2O14787 897 aaKnown RBP27.56■■■□□ 2
CBX3-204ENST00000456948 NEFLP07196 543 aa27.56■■■□□ 2
CBX3-204ENST00000456948 VCAM1P19320 739 aa27.56■■■□□ 2
CBX3-204ENST00000456948 COA7Q96BR5 231 aa27.56■■■□□ 2
CBX3-204ENST00000456948 TRIM47Q96LD4 638 aa27.56■■■□□ 2
CBX3-204ENST00000456948 GOPCQ9HD26 462 aa27.56■■■□□ 2
CBX3-204ENST00000456948 SRRDQ9UH36 339 aa27.56■■■□□ 2
CBX3-204ENST00000456948 TMX2Q9Y320 296 aa27.56■■■□□ 2
CBX3-204ENST00000456948 SMIM22K7EJ46 135 aa27.55■■■□□ 2
CBX3-204ENST00000456948 RASA1P20936 1047 aa27.55■■■□□ 2
CBX3-204ENST00000456948 SLC9C1Q4G0N8 1177 aa27.55■■■□□ 2
CBX3-204ENST00000456948 PPP4R3BQ5MIZ7 849 aa27.55■■■□□ 2
CBX3-204ENST00000456948 CATSPERGQ6ZRH7 1159 aa27.55■■■□□ 2
CBX3-204ENST00000456948 GPRC5AQ8NFJ5 357 aa27.55■■■□□ 2
CBX3-204ENST00000456948 RAET1EQ8TD07 263 aa27.55■■■□□ 2
CBX3-204ENST00000456948 CCDC171Q6TFL3 1326 aa27.55■■■□□ 2
CBX3-204ENST00000456948 EEF2P13639 858 aaKnown RBP27.54■■■□□ 2
CBX3-204ENST00000456948 PDE4AP27815 886 aa27.54■■■□□ 2
CBX3-204ENST00000456948 TTC22Q5TAA0 569 aa27.54■■■□□ 2
CBX3-204ENST00000456948 CWC27Q6UX04 472 aaKnown RBP27.54■■■□□ 2
CBX3-204ENST00000456948 RPAP3Q9H6T3 665 aaPredicted RBP27.54■■■□□ 2
CBX3-204ENST00000456948 HOXC10Q9NYD6 342 aa27.54■■■□□ 2
CBX3-204ENST00000456948 MYPNQ86TC9 1320 aa27.53■■■□□ 2
CBX3-204ENST00000456948 A0A1W2PRG0 241 aa27.53■■■□□ 2
CBX3-204ENST00000456948 TSPY3P0CV98 308 aa27.53■■■□□ 2
CBX3-204ENST00000456948 TSPY8P0CW00 308 aa27.53■■■□□ 2
CBX3-204ENST00000456948 CENPQQ7L2Z9 268 aaPredicted RBP27.53■■■□□ 2
CBX3-204ENST00000456948 VCPKMTQ9H867 229 aa27.53■■■□□ 2
CBX3-204ENST00000456948 MORF4L1Q9UBU8 362 aa27.53■■■□□ 2
CBX3-204ENST00000456948 HSPD1P10809 573 aaKnown RBP27.52■■■□□ 2
CBX3-204ENST00000456948 TANGO6Q9C0B7 1094 aa27.52■■■□□ 2
CBX3-204ENST00000456948 PTCH2Q9Y6C5 1203 aa27.52■■■□□ 2
CBX3-204ENST00000456948 PRDM1O75626 825 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 FGAP02671 866 aa27.51■■□□□ 1.99
CBX3-204ENST00000456948 CCNA1P78396 465 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms