RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 HABP4Q5JVS0 413 aaKnown RBP26.33■■□□□ 1.81
SEC22C-213ENST00000456222 SLC44A5Q8NCS7 719 aa26.33■■□□□ 1.81
SEC22C-213ENST00000456222 C12orf42Q96LP6 360 aa26.33■■□□□ 1.81
SEC22C-213ENST00000456222 DEFB118Q96PH6 123 aa26.33■■□□□ 1.81
SEC22C-213ENST00000456222 FEZ1Q99689 392 aa26.33■■□□□ 1.81
SEC22C-213ENST00000456222 PORCNQ9H237 461 aa26.33■■□□□ 1.81
SEC22C-213ENST00000456222 CHMP4BQ9H444 224 aaKnown RBP26.33■■□□□ 1.81
SEC22C-213ENST00000456222 PAK6Q9NQU5 681 aaPredicted RBP26.33■■□□□ 1.81
SEC22C-213ENST00000456222 MYH8P13535 1937 aa26.32■■□□□ 1.8
SEC22C-213ENST00000456222 MBD4O95243 580 aa26.32■■□□□ 1.8
SEC22C-213ENST00000456222 SEPT2Q15019 361 aa26.32■■□□□ 1.8
SEC22C-213ENST00000456222 GPRC5AQ8NFJ5 357 aa26.32■■□□□ 1.8
SEC22C-213ENST00000456222 PAGR1Q9BTK6 254 aa26.32■■□□□ 1.8
SEC22C-213ENST00000456222 GCC1Q96CN9 775 aa26.31■■□□□ 1.8
SEC22C-213ENST00000456222 LRRCC1Q9C099 1032 aa26.31■■□□□ 1.8
SEC22C-213ENST00000456222 KIAA1683Q9H0B3 1180 aa26.31■■□□□ 1.8
SEC22C-213ENST00000456222 CNMDO75829 334 aa26.3■■□□□ 1.8
SEC22C-213ENST00000456222 FARP2O94887 1054 aaPredicted RBP26.3■■□□□ 1.8
SEC22C-213ENST00000456222 VCAM1P19320 739 aa26.3■■□□□ 1.8
SEC22C-213ENST00000456222 ERVK-9P63128 1117 aa26.3■■□□□ 1.8
SEC22C-213ENST00000456222 ERVK-24P63145 666 aa26.3■■□□□ 1.8
SEC22C-213ENST00000456222 TRIB2Q92519 343 aa26.3■■□□□ 1.8
SEC22C-213ENST00000456222 DYNLL2Q96FJ2 89 aa26.3■■□□□ 1.8
SEC22C-213ENST00000456222 A0A1W2PRG0 241 aa26.29■■□□□ 1.8
SEC22C-213ENST00000456222 HMGCRP04035 888 aa26.29■■□□□ 1.8
SEC22C-213ENST00000456222 CYP2B6P20813 491 aa26.29■■□□□ 1.8
SEC22C-213ENST00000456222 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.29■■□□□ 1.8
SEC22C-213ENST00000456222 CYP2D7A0A087X1C5 515 aa26.28■■□□□ 1.8
SEC22C-213ENST00000456222 CRISPLD2Q9H0B8 497 aa26.28■■□□□ 1.8
SEC22C-213ENST00000456222 CABP5Q9NP86 173 aa26.28■■□□□ 1.8
SEC22C-213ENST00000456222 COLQQ9Y215 455 aaPredicted RBP26.28■■□□□ 1.8
SEC22C-213ENST00000456222 ALPK3Q96L96 1907 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L15C9J2P7 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L13C9JLJ4 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L11C9JVI0 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L18D6R9N7 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L22D6RA61 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L17D6RBQ6 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L19D6RCP7 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L20D6RJB6 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 TFRCP02786 760 aaKnown RBP26.27■■□□□ 1.8
SEC22C-213ENST00000456222 USP17L24Q0WX57 530 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 CATSPERGQ6ZRH7 1159 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 CLEC10AQ8IUN9 316 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 DPF3Q92784 378 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 RLFQ13129 1914 aa26.27■■□□□ 1.8
SEC22C-213ENST00000456222 SZT2Q5T011 3432 aa26.26■■□□□ 1.79
SEC22C-213ENST00000456222 MPHOSPH10O00566 681 aaKnown RBP26.26■■□□□ 1.79
SEC22C-213ENST00000456222 TSHZ3Q63HK5 1081 aa26.26■■□□□ 1.79
SEC22C-213ENST00000456222 USP6NLQ92738 828 aa26.26■■□□□ 1.79
SEC22C-213ENST00000456222 USP14P54578 494 aa26.25■■□□□ 1.79
SEC22C-213ENST00000456222 KIAA1755Q5JYT7 1200 aa26.25■■□□□ 1.79
SEC22C-213ENST00000456222 GPR142Q7Z601 462 aa26.25■■□□□ 1.79
SEC22C-213ENST00000456222 DIS3LQ8TF46 1054 aaKnown RBP26.25■■□□□ 1.79
SEC22C-213ENST00000456222 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.25■■□□□ 1.79
SEC22C-213ENST00000456222 PUS7LQ9H0K6 701 aaKnown RBP26.25■■□□□ 1.79
SEC22C-213ENST00000456222 RPAP3Q9H6T3 665 aaPredicted RBP26.25■■□□□ 1.79
SEC22C-213ENST00000456222 MAPK4P31152 587 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 UBE3CQ15386 1083 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 MORN1Q5T089 497 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 SIAH1Q8IUQ4 282 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 GTF3C2Q8WUA4 911 aaPredicted RBP26.24■■□□□ 1.79
SEC22C-213ENST00000456222 NUDT12Q9BQG2 462 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 DCTPP1Q9H773 170 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 ATP8A2Q9NTI2 1148 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 BTBD7Q9P203 1132 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 RABGAP1Q9Y3P9 1069 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 DNAH12Q6ZR08 3092 aa26.24■■□□□ 1.79
SEC22C-213ENST00000456222 AKR1B1P15121 316 aa26.23■■□□□ 1.79
SEC22C-213ENST00000456222 CCL14Q16627 93 aa26.23■■□□□ 1.79
SEC22C-213ENST00000456222 MAP3K21Q5TCX8 1036 aa26.23■■□□□ 1.79
SEC22C-213ENST00000456222 SOCS4Q8WXH5 440 aa26.23■■□□□ 1.79
SEC22C-213ENST00000456222 ECHDC1Q9NTX5 307 aa26.23■■□□□ 1.79
SEC22C-213ENST00000456222 RPTORQ8N122 1335 aa26.22■■□□□ 1.79
SEC22C-213ENST00000456222 SPDYE16A6NNV3 312 aaPredicted RBP26.22■■□□□ 1.79
SEC22C-213ENST00000456222 USP17L12C9JPN9 530 aa26.22■■□□□ 1.79
SEC22C-213ENST00000456222 USP17L21D6R901 530 aa26.22■■□□□ 1.79
SEC22C-213ENST00000456222 XRCC5P13010 732 aaKnown RBP26.22■■□□□ 1.79
SEC22C-213ENST00000456222 C12orf60Q5U649 245 aa26.22■■□□□ 1.79
SEC22C-213ENST00000456222 PLEKHH3Q7Z736 793 aa26.22■■□□□ 1.79
SEC22C-213ENST00000456222 PAWRQ96IZ0 340 aaKnown RBP26.22■■□□□ 1.79
SEC22C-213ENST00000456222 HMX1Q9NP08 348 aaPredicted RBP26.22■■□□□ 1.79
SEC22C-213ENST00000456222 PRKAR2AP13861 404 aaKnown RBP26.21■■□□□ 1.79
SEC22C-213ENST00000456222 MNX1P50219 401 aaPredicted RBP26.21■■□□□ 1.79
SEC22C-213ENST00000456222 HTATIP2Q9BUP3 242 aa26.21■■□□□ 1.79
SEC22C-213ENST00000456222 SWAP70Q9UH65 585 aa26.21■■□□□ 1.79
SEC22C-213ENST00000456222 PCDHB15Q9Y5E8 787 aa26.21■■□□□ 1.79
SEC22C-213ENST00000456222 SLC4A4Q9Y6R1 1079 aa26.21■■□□□ 1.79
SEC22C-213ENST00000456222 LBX2Q6XYB7 198 aa26.2■■□□□ 1.78
SEC22C-213ENST00000456222 TMEM179Q6ZVK1 233 aa26.2■■□□□ 1.78
SEC22C-213ENST00000456222 CCAR1Q8IX12 1150 aaKnown RBP26.2■■□□□ 1.78
SEC22C-213ENST00000456222 PARP14Q460N5 1801 aa26.2■■□□□ 1.78
SEC22C-213ENST00000456222 A0A0G2JMZ2 1700 aa26.19■■□□□ 1.78
SEC22C-213ENST00000456222 LAMA3Q16787 3333 aa26.19■■□□□ 1.78
SEC22C-213ENST00000456222 CDK8P49336 464 aa26.19■■□□□ 1.78
SEC22C-213ENST00000456222 FXR1P51114 621 aaKnown RBP eCLIP26.19■■□□□ 1.78
SEC22C-213ENST00000456222 CHRDL2Q6WN34 429 aa26.19■■□□□ 1.78
SEC22C-213ENST00000456222 ZKSCAN1P17029 563 aaPredicted RBP26.18■■□□□ 1.78
SEC22C-213ENST00000456222 CACNB2Q08289 660 aaPredicted RBP26.18■■□□□ 1.78
SEC22C-213ENST00000456222 CTR9Q6PD62 1173 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms