RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 RPS6KC1Q96S38 1066 aa6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 UBA5Q9GZZ9 404 aa6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 CCDC113Q9H0I3 377 aa6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 DDX21Q9NR30 783 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 DBF4Q9UBU7 674 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 USP16Q9Y5T5 823 aa6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 PAPPAQ13219 1627 aa6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 THSD7AQ9UPZ6 1657 aa6.39□□□□□ -1.39
HMGB1P4-201ENST00000455362 F6X3S4 739 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 EML1O00423 815 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 KCNQ2O43526 872 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 GDF9O60383 454 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 IL2RAP01589 272 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 CNGA1P29973 690 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 CBLBQ13191 982 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 OS9Q13438 667 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 PROSER3Q2NL68 480 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZNF772Q68DY9 489 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 INTS3Q68E01 1043 aaKnown RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 POTEAQ6S8J7 498 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZNF598Q86UK7 904 aaKnown RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 SNX29Q8TEQ0 813 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZNF296Q8WUU4 475 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 SYTL4Q96C24 671 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 ACSBG1Q96GR2 724 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 EAF1Q96JC9 268 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 BCO2Q9BYV7 579 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 PHAXQ9H814 394 aaKnown RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 HYPKQ9NX55 129 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 TMEM260Q9NX78 707 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 PKD2L1Q9P0L9 805 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 FOXD3Q9UJU5 478 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 ABCC4O15439 1325 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 RGS12O14924 1447 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 KCPQ6ZWJ8 1503 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 C5P01031 1676 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 DOT1LQ8TEK3 1739 aa6.38□□□□□ -1.39
HMGB1P4-201ENST00000455362 TNFRSF21O75509 655 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 ANXA1P04083 346 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 ADH1AP07327 375 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 GSTT1P30711 240 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 ADD1P35611 737 aaKnown RBP6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 RBM6P78332 1123 aaKnown RBP6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 CLN3Q13286 438 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 CCDC85BQ15834 202 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 TSHZ1Q6ZSZ6 1077 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 WDR75Q8IWA0 830 aaKnown RBP6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 ITPRIPQ8IWB1 547 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 TMEM74Q96NL1 305 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 TEX13AQ9BXU3 409 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 PHACTR1Q9C0D0 580 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 NPHS2Q9NP85 383 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZBTB40Q9NUA8 1239 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 DDX19BQ9UMR2 479 aa6.37□□□□□ -1.39
HMGB1P4-201ENST00000455362 BRWD3Q6RI45 1802 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 SBF2Q86WG5 1849 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 ERBB4Q15303 1308 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 PI4KAP2A4QPH2 592 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 PDPK1O15530 556 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 SH3BP5O60239 455 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 PHACTR2O75167 634 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 A1BGP04217 495 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 MYL6BP14649 208 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 CCT4P50991 539 aaKnown RBP6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 FAM182BQ5T319 152 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 SH3PXD2AQ5TCZ1 1133 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 NBPF10Q6P3W6 841 aaKnown RBP6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 KSR2Q6VAB6 950 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 PGBD3Q8N328 593 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 PI4KAP1Q8N8J0 262 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 SMARCC1Q92922 1105 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 NT5C1AQ9BXI3 368 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 CHMP4BQ9H444 224 aaKnown RBP6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZFYVE28Q9HCC9 887 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 USP3Q9Y6I4 520 aa6.36□□□□□ -1.39
HMGB1P4-201ENST00000455362 TRIM37O94972 964 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 STARD3NLO95772 234 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 CYP19A1P11511 503 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 PIP4K2AP48426 406 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 CENPCQ03188 943 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 SPTY2D1Q68D10 685 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 CCSAPQ6IQ19 270 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 TMEM214Q6NUQ4 689 aaKnown RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 SLC4A10Q6U841 1118 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 COPS6Q7L5N1 327 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 KRT27Q7Z3Y8 459 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZNF438Q7Z4V0 828 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 DNAJC10Q8IXB1 793 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 XAGE3Q8WTP9 111 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 RELTQ969Z4 430 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 ZSCAN10Q96SZ4 725 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
HMGB1P4-201ENST00000455362 RGS17Q9UGC6 210 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms