RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CCDC181Q5TID7 509 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 FMR1NBQ8N0W7 255 aaPredicted RBP10.87□□□□□ -0.67
LINC01940-201ENST00000455228 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 HAUS7Q99871 368 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 DNAI1Q9UI46 699 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 CPLX1O14810 134 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 GCKP35557 465 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 KBTBD12Q3ZCT8 623 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 OTUD7BQ6GQQ9 843 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 KCNG4Q8TDN1 519 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 LMBR1Q8WVP7 490 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 C8orf76Q96K31 380 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 AGBL1Q96MI9 1066 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 JCADQ9P266 1359 aa10.87□□□□□ -0.67
LINC01940-201ENST00000455228 TPPPO94811 219 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 SERPINC1P01008 464 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 CYP11B2P19099 503 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 HOXD10P28358 340 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 FOXD4Q12950 439 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 MFSD4BQ5TF39 518 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 APBB1IPQ7Z5R6 666 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 CCDC50Q8IVM0 306 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 UBR1Q8IWV7 1749 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PSDA5PKW4 1024 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 SPTLC2O15270 562 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 RNF8O76064 485 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 IDO1P14902 403 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PDIA3P30101 505 aaKnown RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PABPC1LQ4VXU2 614 aaKnown RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 FBXW10Q5XX13 1052 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 ARMCX5Q6P1M9 558 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 CATIPQ7Z7H3 387 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 METTL22Q9BUU2 404 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 DDX20Q9UHI6 824 aaKnown RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 A6NHS1 94 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 E7EWF7 191 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 CYP27B1O15528 508 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 URI1O94763 535 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PENKP01210 267 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 MCCD1P59942 119 aaPredicted RBP10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PHEXP78562 749 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 SLMAPQ14BN4 828 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 ESCO1Q5FWF5 840 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 HOXC10Q9NYD6 342 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 PHF24Q9UPV7 400 aa10.86□□□□□ -0.67
LINC01940-201ENST00000455228 A0A087WZG4 1122 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 A0A1W2PQ27 194 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 A0A1W2PQ64 194 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 A0A1W2PQD8 194 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 CCDC151A5D8V7 595 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 FERP16591 822 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 PIP4K2AP48426 406 aaPredicted RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 AARSP49588 968 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 CARMIL3Q8ND23 1372 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ERMNQ8TAM6 284 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ANKRD24Q8TF21 1146 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 PAG1Q9NWQ8 432 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ANKIB1Q9P2G1 1089 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 CLIC4Q9Y696 253 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 SH3TC1Q8TE82 1336 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 MGRN1O60291 552 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 MAGEA10P43363 369 aaPredicted RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 CFAP100Q494V2 611 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 CCDC80Q76M96 950 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 GALNT15Q8N3T1 639 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 FAM71BQ8TC56 605 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ZNF274Q96GC6 653 aaPredicted RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ANKARQ7Z5J8 1434 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 KIF5CO60282 957 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ZNF202O95125 648 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 GNL2Q13823 731 aaKnown RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 BTG3Q14201 252 aaPredicted RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 TBC1D10BQ4KMP7 808 aaPredicted RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 ZNF790Q6PG37 636 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 TAX1BP1Q86VP1 789 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
LINC01940-201ENST00000455228 HELLSQ9NRZ9 838 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 MYO6Q9UM54 1294 aa10.85□□□□□ -0.67
LINC01940-201ENST00000455228 SLIT1O75093 1534 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 ZEB2O60315 1214 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 NLRP12P59046 1061 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 ETF1P62495 437 aaKnown RBP10.84□□□□□ -0.67
LINC01940-201ENST00000455228 FANCCQ00597 558 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 BRD3Q15059 726 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 PDIA6Q15084 440 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 RAB21Q9UL25 225 aa10.84□□□□□ -0.67
LINC01940-201ENST00000455228 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms