RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ERVK-24P63145 666 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 RRP1BQ14684 758 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 PLEKHH3Q7Z736 793 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 TTC6Q86TZ1 520 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 DIS3LQ8TF46 1054 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 TRIB2Q92519 343 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 APBA2Q99767 749 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 GDF15Q99988 308 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 DBNDD2Q9BQY9 259 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 EHD4Q9H223 541 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 SERPINB13Q9UIV8 391 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 PALD1Q9ULE6 856 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 NOP58Q9Y2X3 529 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 RABGAP1Q9Y3P9 1069 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 USP17L15C9J2P7 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L13C9JLJ4 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L11C9JVI0 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L18D6R9N7 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L22D6RA61 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L17D6RBQ6 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L19D6RCP7 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L20D6RJB6 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 MSCO60682 206 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 GDF11O95390 407 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 USP17L24Q0WX57 530 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 MAP3K12Q12852 859 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 MFSD14CQ5VZR4 134 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 GPR142Q7Z601 462 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 ZNF467Q7Z7K2 595 aaPredicted RBP9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 ERC1Q8IUD2 1116 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 TMEM57Q8N5G2 664 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 SLC17A8Q8NDX2 589 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 C12orf42Q96LP6 360 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 DNAJC18Q9H819 358 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 CABP5Q9NP86 173 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 RBPJLQ9UBG7 517 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 STK24Q9Y6E0 443 aa9.77□□□□□ -0.85
NIF3L1-209ENST00000454952 BCAR3O75815 825 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 IDH1O75874 414 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 GH2P01242 217 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 ZAP70P43403 619 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 TRIM32Q13049 653 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 LRIT3Q3SXY7 679 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 HSP90AB4PQ58FF6 505 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 MORN1Q5T089 497 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 TATDN1Q6P1N9 297 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 ADGRA1Q86SQ6 560 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 TDHQ8IZJ6 230 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 USP6NLQ92738 828 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 PAGR1Q9BTK6 254 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 KIAA1683Q9H0B3 1180 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 PIH1D3Q9NQM4 214 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 SAP30BPQ9UHR5 308 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 DBNLQ9UJU6 430 aaKnown RBP9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 ZMYND8Q9ULU4 1186 aaPredicted RBP9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
NIF3L1-209ENST00000454952 SLC15A5A6NIM6 579 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 MAGEA10P43363 369 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 CACNB2Q08289 660 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 RAB3GAP1Q15042 981 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 TTF1Q15361 905 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 ABCB5Q2M3G0 1257 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 CERKLQ49MI3 558 aaPredicted RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 LBX2Q6XYB7 198 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 MAGEB6Q8N7X4 407 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 UBE2OQ9C0C9 1292 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 RANBP2P49792 3224 aaKnown RBP9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 FRMPD3Q5JV73 1810 aa9.75□□□□□ -0.85
NIF3L1-209ENST00000454952 SOX1O00570 391 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 COL6A1P12109 1028 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 DYNLL1P63167 89 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 JAG1P78504 1218 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 Q3C1V9 767 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 CATSPERGQ6ZRH7 1159 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 LRCH3Q96II8 777 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 PORCNQ9H237 461 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 SLC5A4Q9NY91 659 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 NAV1Q8NEY1 1877 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 MYH8P13535 1937 aa9.74□□□□□ -0.85
NIF3L1-209ENST00000454952 DLL1O00548 723 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 STRNO43815 780 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 POLR3DP05423 398 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 HOXC6P09630 235 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 SYN1P17600 705 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 VCAM1P19320 739 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 PTPREP23469 700 aa9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 CCND3P30281 292 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-209ENST00000454952 ZYXQ15942 572 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms