RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 DOK7Q18PE1 504 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 CCDC183Q5T5S1 534 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 MCTP2Q6DN12 878 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 SPATA32Q96LK8 384 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 NCOA5Q9HCD5 579 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 CEP131Q9UPN4 1083 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 IGKV6D-41A0A0C4DH26 115 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 GOLGA6L4A6NEF3 574 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 C21orf2O43822 256 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 PPP6R2O75170 966 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 CDC27P30260 824 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 GRIK5Q16478 980 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 ASPRV1Q53RT3 343 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 RILPL1Q5EBL4 403 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 MAPKAPK5Q8IW41 473 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 ELOA2Q8IYF1 753 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 LEO1Q8WVC0 666 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 DPF2Q92785 391 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 MKL1Q969V6 931 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 GPR101Q96P66 508 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 GLT8D2Q9H1C3 349 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 TAOK3Q9H2K8 898 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 MYH4Q9Y623 1939 aa7.91□□□□□ -1.14
ECHDC1-210ENST00000454859 SIPA1L1O43166 1804 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 GOLGA6L3A6NEY3 463 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 MMP1P03956 469 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 KIF23Q02241 960 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 AOC3Q16853 763 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 DAGLBQ8NCG7 672 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 PNMA1Q8ND90 353 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 CCDC148Q8NFR7 591 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 JDP2Q8WYK2 163 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 HOOK2Q96ED9 719 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 DDX11Q96FC9 970 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 DBNDD1Q9H9R9 158 aa7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 GPHNQ9NQX3 736 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-210ENST00000454859 PALM3A6NDB9 673 aaPredicted RBP7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 MYO1BO43795 1136 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 TTLL1O95922 423 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 PFKFB3Q16875 520 aaPredicted RBP7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 GPATCH4Q5T3I0 446 aaKnown RBP7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 MYSM1Q5VVJ2 828 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 KRT40Q6A162 431 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 ADALQ6DHV7 355 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 PPP1R18Q6NYC8 613 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 TATDN1Q6P1N9 297 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.151e-6■□□□□ 8
ECHDC1-210ENST00000454859 NYAP2Q9P242 653 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 CNPY2Q9Y2B0 182 aa7.9□□□□□ -1.15
ECHDC1-210ENST00000454859 ESYT2A0FGR8 921 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SNHG28P0DPA3 235 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 TNNI2P48788 182 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 PLCD1P51178 756 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 ZNF280AP59817 542 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 ZNF579Q8NAF0 562 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 GPT2Q8TD30 523 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 FAM151AQ8WW52 585 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 ZBED3Q96IU2 234 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 PYM1Q9BRP8 204 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SLC26A6Q9BXS9 759 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 KANSL2Q9H9L4 492 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 IL17RBQ9NRM6 502 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 MTMR4Q9NYA4 1195 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 CNTNAP5Q8WYK1 1306 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 CYP2D7A0A087X1C5 515 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 FAM237AA0A1B0GTK4 181 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SPDYE2BA6NHP3 402 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SPDYE6P0CI01 402 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 CYP2D6P10635 497 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SCG2P13521 617 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 TNFAIP1Q13829 316 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SLC39A14Q15043 492 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 DLGAP5Q15398 846 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 CIAPIN1Q6FI81 312 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 LRSAM1Q6UWE0 723 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 TMEM179Q6ZVK1 233 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 NOSTRINQ8IVI9 506 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 BICD2Q8TD16 824 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 FBXW7Q969H0 707 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 TRIM34Q9BYJ4 488 aa7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 NOL7Q9UMY1 257 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-210ENST00000454859 YDJCA8MPS7 323 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 PARP1P09874 1014 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 GNL2Q13823 731 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 UVSSAQ2YD98 709 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 ZSCAN23Q3MJ62 389 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 CFAP100Q494V2 611 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 NUP133Q8WUM0 1156 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 DCAF4Q8WV16 495 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 TIGD1Q96MW7 591 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 TMEM47Q9BQJ4 181 aa7.88□□□□□ -1.15
ECHDC1-210ENST00000454859 INCENPQ9NQS7 918 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms