RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 POLR2DO15514 142 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 SLU7O95391 586 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 SERPINC1P01008 464 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 SLFN14P0C7P3 912 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 PLCD1P51178 756 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 GRIN1Q05586 938 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 ANKS1AQ92625 1134 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 PYM1Q9BRP8 204 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 INTS13Q9NVM9 706 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 FANCLQ9NW38 375 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 MINDY4BA8MYZ0 360 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 ARHGAP6O43182 974 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 PPP4R3BQ5MIZ7 849 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 GSDMAQ96QA5 445 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 CRNKL1Q9BZJ0 848 aaKnown RBP14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 CABP5Q9NP86 173 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 ABCF2Q9UG63 623 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 NARFQ9UHQ1 456 aa14.31□□□□□ -0.12
ECHDC1-209ENST00000454591 SBF2Q86WG5 1849 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 TAF1LQ8IZX4 1826 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 GOLGA6L9A6NEM1 432 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 FOXN1O15353 648 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 STX10O60499 249 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 RPS6KA4O75676 772 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 TOP1P11387 765 aaKnown RBP14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 ATP2C1P98194 919 aaPredicted RBP14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 CFAP100Q494V2 611 aa14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 TRMT1Q9NXH9 659 aaKnown RBP14.3□□□□□ -0.12
ECHDC1-209ENST00000454591 LY75O60449 1722 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 DYNLL1P63167 89 aaKnown RBP14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 CCDC178Q5BJE1 867 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 ZNF397Q8NF99 534 aaPredicted RBP14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 SRRTQ9BXP5 876 aaKnown RBP14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 SH3GLB2Q9NR46 395 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 OGFRQ9NZT2 677 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 ZNF215Q9UL58 517 aaPredicted RBP14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 NFE2L3Q9Y4A8 694 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 BTAF1O14981 1849 aa14.29□□□□□ -0.12
ECHDC1-209ENST00000454591 THSD7AQ9UPZ6 1657 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 A0A1B0GTH6 734 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 HIBADHP31937 336 aaKnown RBP14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 MECOMQ03112 1051 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 CUL4BQ13620 913 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 NR1I3Q14994 352 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 SPTY2D1Q68D10 685 aaPredicted RBP14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 SPECC1LQ69YQ0 1117 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 TRIM65Q6PJ69 517 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 C15orf52Q6ZUT6 534 aaKnown RBP14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 CELF1Q92879 486 aaKnown RBP14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 MED15Q96RN5 788 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 FAM53CQ9NYF3 392 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 VPS54Q9P1Q0 977 aa14.28□□□□□ -0.12
ECHDC1-209ENST00000454591 USP17L12C9JPN9 530 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 USP17L21D6R901 530 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 PLEKHA8P1O95397 391 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 GTF2E1P29083 439 aaPredicted RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 PBX1P40424 430 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 DPYDQ12882 1025 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 PFKFB3Q16875 520 aaPredicted RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 TTC38Q5R3I4 469 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 UTP14CQ5TAP6 766 aaKnown RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 CDKAL1Q5VV42 579 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 SPATA1Q5VX52 437 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 TBC1D9BQ66K14 1250 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 APTXQ7Z2E3 356 aaKnown RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 NLRP3Q96P20 1036 aa14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 MKRN1Q9UHC7 482 aaKnown RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 DDX41Q9UJV9 622 aaKnown RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.12
ECHDC1-209ENST00000454591 NAV1Q8NEY1 1877 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 A0A087X0B3 334 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 KCNQ2O43526 872 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 SCG2P13521 617 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 FECHP22830 423 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 E2F4Q16254 413 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 EARS2Q5JPH6 523 aaKnown RBP14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 SPECC1Q5M775 1068 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
ECHDC1-209ENST00000454591 CMTR1Q8N1G2 835 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms