RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 OXR1Q8N573 874 aa7.86□□□□□ -1.15
CUL3-208ENST00000454323 BAHD1Q8TBE0 780 aaPredicted RBP7.86□□□□□ -1.15
CUL3-208ENST00000454323 RBCK1Q9BYM8 510 aa7.86□□□□□ -1.15
CUL3-208ENST00000454323 ZSWIM5Q9P217 1185 aa7.86□□□□□ -1.15
CUL3-208ENST00000454323 PRR33A8MZF0 331 aa7.85□□□□□ -1.15
CUL3-208ENST00000454323 NFIXQ14938 502 aa7.85□□□□□ -1.15
CUL3-208ENST00000454323 UBE3DQ7Z6J8 389 aa7.85□□□□□ -1.15
CUL3-208ENST00000454323 C20orf173Q96LM9 149 aa7.85□□□□□ -1.15
CUL3-208ENST00000454323 TRIT1Q9H3H1 467 aaKnown RBP7.85□□□□□ -1.15
CUL3-208ENST00000454323 CWC22Q9HCG8 908 aaKnown RBP7.85□□□□□ -1.15
CUL3-208ENST00000454323 PRAMEF27A3QJZ7 478 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 FOXD2O60548 495 aaPredicted RBP7.84□□□□□ -1.15
CUL3-208ENST00000454323 CBX7O95931 251 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 RECKO95980 971 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 BMP7P18075 431 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 HK2P52789 917 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 HID1Q8IV36 788 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 PDZD8Q8NEN9 1154 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 DHX38Q92620 1227 aaKnown RBP7.84□□□□□ -1.15
CUL3-208ENST00000454323 C8orf37Q96NL8 207 aa7.84□□□□□ -1.15
CUL3-208ENST00000454323 CNOT6Q9ULM6 557 aaKnown RBP7.84□□□□□ -1.15
CUL3-208ENST00000454323 IGHA2P01877 340 aa7.83□□□□□ -1.16
CUL3-208ENST00000454323 BMP6P22004 513 aa7.83□□□□□ -1.16
CUL3-208ENST00000454323 DLG4P78352 724 aa7.83□□□□□ -1.16
CUL3-208ENST00000454323 TMEM132EQ6IEE7 984 aa7.83□□□□□ -1.16
CUL3-208ENST00000454323 WNT10AQ9GZT5 417 aa7.83□□□□□ -1.16
CUL3-208ENST00000454323 DNAJC25-GNG10A0A024R161 153 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 FITM1A5D6W6 292 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 ETV3P41162 512 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 ETF1P62495 437 aaKnown RBP7.82□□□□□ -1.16
CUL3-208ENST00000454323 EAPPQ56P03 285 aaPredicted RBP7.82□□□□□ -1.16
CUL3-208ENST00000454323 TPTE2Q6XPS3 522 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 GRIN3AQ8TCU5 1115 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 ANKRD24Q8TF21 1146 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 SNCAIPQ9Y6H5 919 aa7.82□□□□□ -1.16
CUL3-208ENST00000454323 ENC1O14682 589 aa7.81□□□□□ -1.16
CUL3-208ENST00000454323 SASH1O94885 1247 aa7.81□□□□□ -1.16
CUL3-208ENST00000454323 SLBPQ14493 270 aaKnown RBP eCLIP7.81□□□□□ -1.16
CUL3-208ENST00000454323 RALGPS1Q5JS13 557 aa7.81□□□□□ -1.16
CUL3-208ENST00000454323 NXPE4Q6UWF7 544 aa7.81□□□□□ -1.16
CUL3-208ENST00000454323 RTEL1Q9NZ71 1219 aa7.81□□□□□ -1.16
CUL3-208ENST00000454323 TEX51A0A1B0GUA7 166 aa7.8□□□□□ -1.16
CUL3-208ENST00000454323 CST3P01034 146 aaPredicted RBP7.8□□□□□ -1.16
CUL3-208ENST00000454323 TMC7Q7Z402 723 aa7.8□□□□□ -1.16
CUL3-208ENST00000454323 CREG2Q8IUH2 290 aa7.8□□□□□ -1.16
CUL3-208ENST00000454323 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
CUL3-208ENST00000454323 KCNC2Q96PR1 638 aa7.8□□□□□ -1.16
CUL3-208ENST00000454323 RNF32Q9H0A6 362 aa7.8□□□□□ -1.16
CUL3-208ENST00000454323 GIPC1O14908 333 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 ESR1P03372 595 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 TNK2Q07912 1038 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 MRPL58Q14197 206 aaKnown RBP7.79□□□□□ -1.16
CUL3-208ENST00000454323 SNX17Q15036 470 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
CUL3-208ENST00000454323 SPPL2CQ8IUH8 684 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 C3orf58Q8NDZ4 430 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 MCOLN1Q9GZU1 580 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 KCNK12Q9HB15 430 aa7.79□□□□□ -1.16
CUL3-208ENST00000454323 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 A0A0G2JLL6 359 aaPredicted RBP7.78□□□□□ -1.16
CUL3-208ENST00000454323 TREHO43280 583 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
CUL3-208ENST00000454323 CHRNEQ04844 493 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 NR0B2Q15466 257 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 PI16Q6UXB8 463 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 GPATCH2Q9NW75 528 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
CUL3-208ENST00000454323 ERVFC1P60507 584 aa7.77□□□□□ -1.17
CUL3-208ENST00000454323 ZC3H6P61129 1189 aaKnown RBP7.77□□□□□ -1.17
CUL3-208ENST00000454323 FMR1Q06787 632 aaKnown RBP eCLIP7.77□□□□□ -1.17
CUL3-208ENST00000454323 LRFN4Q6PJG9 635 aa7.77□□□□□ -1.17
CUL3-208ENST00000454323 ZNF605Q86T29 641 aa7.77□□□□□ -1.17
CUL3-208ENST00000454323 MARCH10Q8NA82 808 aaPredicted RBP7.77□□□□□ -1.17
CUL3-208ENST00000454323 FBF1Q8TES7 1133 aa7.77□□□□□ -1.17
CUL3-208ENST00000454323 BACH2Q9BYV9 841 aa7.77□□□□□ -1.17
CUL3-208ENST00000454323 FBRSQ9HAH7 460 aa7.77□□□□□ -1.17
CUL3-208ENST00000454323 TPP2P29144 1249 aaPredicted RBP7.76□□□□□ -1.17
CUL3-208ENST00000454323 DSC3Q14574 896 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 TSNAXIP1Q2TAA8 658 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 LDLRAD1Q5T700 205 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 PRAMEF13Q5VWM6 474 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 PCNX4Q63HM2 1172 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 SREK1Q8WXA9 508 aaKnown RBP7.76□□□□□ -1.17
CUL3-208ENST00000454323 PLPPR2Q96GM1 343 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 INTS4Q96HW7 963 aaKnown RBP7.76□□□□□ -1.17
CUL3-208ENST00000454323 DRC1Q96MC2 740 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 BCL11AQ9H165 835 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 ADAMTS10Q9H324 1103 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 DUSP13Q9UII6 198 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 KCTD3Q9Y597 815 aa7.76□□□□□ -1.17
CUL3-208ENST00000454323 DUSP4Q13115 394 aa7.75□□□□□ -1.17
CUL3-208ENST00000454323 ZNF552Q9H707 407 aaPredicted RBP7.75□□□□□ -1.17
CUL3-208ENST00000454323 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
CUL3-208ENST00000454323 YBX2Q9Y2T7 364 aaKnown RBP7.75□□□□□ -1.17
CUL3-208ENST00000454323 PNMA6FA0A0J9YX94 578 aa7.74□□□□□ -1.17
CUL3-208ENST00000454323 PAGE1O75459 146 aa7.74□□□□□ -1.17
CUL3-208ENST00000454323 LMNB1P20700 586 aa7.74□□□□□ -1.17
CUL3-208ENST00000454323 PDE6BP35913 854 aa7.74□□□□□ -1.17
CUL3-208ENST00000454323 INPP5AQ14642 412 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms