RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 FAM43AQ8N2R8 423 aa20.51■□□□□ 0.87
CTSB-204ENST00000453527 SRBD1Q8N5C6 995 aaKnown RBP20.51■□□□□ 0.87
CTSB-204ENST00000453527 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
CTSB-204ENST00000453527 MRVI1Q9Y6F6 885 aa20.51■□□□□ 0.87
CTSB-204ENST00000453527 KIF5BP33176 963 aa20.51■□□□□ 0.87
CTSB-204ENST00000453527 CDK8P49336 464 aa20.51■□□□□ 0.87
CTSB-204ENST00000453527 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
CTSB-204ENST00000453527 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.51■□□□□ 0.87
CTSB-204ENST00000453527 CNTNAP5Q8WYK1 1306 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 A0A1B0GVL5 298 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 USP17L3A6NCW0 530 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 USP17L4A6NCW7 530 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 F8W031 263 aaPredicted RBP20.5■□□□□ 0.87
CTSB-204ENST00000453527 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 USP17L1Q7RTZ2 530 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 PNMA1Q8ND90 353 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 SHISA4Q96DD7 197 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 MXD3Q9BW11 206 aa20.5■□□□□ 0.87
CTSB-204ENST00000453527 CMA1P23946 247 aa20.49■□□□□ 0.87
CTSB-204ENST00000453527 CHRNA5P30532 468 aa20.49■□□□□ 0.87
CTSB-204ENST00000453527 NDUFA8P51970 172 aa20.49■□□□□ 0.87
CTSB-204ENST00000453527 RILPL1Q5EBL4 403 aa20.49■□□□□ 0.87
CTSB-204ENST00000453527 PHF20Q9BVI0 1012 aa20.49■□□□□ 0.87
CTSB-204ENST00000453527 WDHD1O75717 1129 aaPredicted RBP20.49■□□□□ 0.87
CTSB-204ENST00000453527 MARCKSP29966 332 aaPredicted RBP20.49■□□□□ 0.87
CTSB-204ENST00000453527 TOB1P50616 345 aaPredicted RBP20.49■□□□□ 0.87
CTSB-204ENST00000453527 VPS54Q9P1Q0 977 aa20.49■□□□□ 0.87
CTSB-204ENST00000453527 hCG_1642624A0A1W2PR95 340 aa20.48■□□□□ 0.87
CTSB-204ENST00000453527 NR5A1Q13285 461 aa20.48■□□□□ 0.87
CTSB-204ENST00000453527 HHIPL2Q6UWX4 724 aa20.48■□□□□ 0.87
CTSB-204ENST00000453527 OXER1Q8TDS5 423 aa20.48■□□□□ 0.87
CTSB-204ENST00000453527 DBNDD1Q9H9R9 158 aa20.48■□□□□ 0.87
CTSB-204ENST00000453527 FAM200AQ8TCP9 573 aa20.48■□□□□ 0.87
CTSB-204ENST00000453527 SNED1Q8TER0 1413 aa20.47■□□□□ 0.87
CTSB-204ENST00000453527 NEDD1Q8NHV4 660 aa20.47■□□□□ 0.87
CTSB-204ENST00000453527 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
CTSB-204ENST00000453527 GRM4Q14833 912 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 ANO6Q4KMQ2 910 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 TEKT1Q969V4 418 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 STX8Q9UNK0 236 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 BAZ2BQ9UIF8 2168 aaKnown RBP20.46■□□□□ 0.87
CTSB-204ENST00000453527 KRT2P35908 639 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 SCNN1DP51172 638 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 FKBP1AP62942 108 aaKnown RBP20.46■□□□□ 0.87
CTSB-204ENST00000453527 HS1BP3Q53T59 392 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 STRIP1Q5VSL9 837 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 KCNQ5Q9NR82 932 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 ADAMTSL1Q8N6G6 1762 aa20.46■□□□□ 0.87
CTSB-204ENST00000453527 CAVIN2O95810 425 aa20.45■□□□□ 0.86
CTSB-204ENST00000453527 SCG2P13521 617 aa20.45■□□□□ 0.86
CTSB-204ENST00000453527 GNAQP50148 359 aa20.45■□□□□ 0.86
CTSB-204ENST00000453527 PICALMQ13492 652 aa20.45■□□□□ 0.86
CTSB-204ENST00000453527 PFKFB3Q16875 520 aaPredicted RBP20.45■□□□□ 0.86
CTSB-204ENST00000453527 USP25Q9UHP3 1055 aa20.45■□□□□ 0.86
CTSB-204ENST00000453527 SCN9AQ15858 1988 aa20.45■□□□□ 0.86
CTSB-204ENST00000453527 CUTAO60888 179 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 PFKFB1P16118 471 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 APOBEC3HQ6NTF7 200 aaKnown RBP20.44■□□□□ 0.86
CTSB-204ENST00000453527 SDF4Q9BRK5 362 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 MRIQ9BWK5 157 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 RTN4Q9NQC3 1192 aaKnown RBP20.44■□□□□ 0.86
CTSB-204ENST00000453527 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
CTSB-204ENST00000453527 MAD2L2Q9UI95 211 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 ZNF646O15015 1829 aaPredicted RBP20.44■□□□□ 0.86
CTSB-204ENST00000453527 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 ZNF202O95125 648 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 CC2D2BQ6DHV5 1058 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 SHC4Q6S5L8 630 aa20.44■□□□□ 0.86
CTSB-204ENST00000453527 DDX4Q9NQI0 724 aaKnown RBP20.44■□□□□ 0.86
CTSB-204ENST00000453527 ECE2O60344 883 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 NOVP48745 357 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 GABPAQ06546 454 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 NPY5RQ15761 445 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 DACT2Q5SW24 774 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 CDC42EP5Q6NZY7 148 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 STAG2Q8N3U4 1231 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 BRMS1Q9HCU9 246 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 HPSEQ9Y251 543 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 MYH8P13535 1937 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 ESPNB1AK53 854 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 CRKP46108 304 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 BAG6P46379 1132 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 RESP18Q5W5W9 173 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 KRI1Q8N9T8 703 aaKnown RBP20.43■□□□□ 0.86
CTSB-204ENST00000453527 ZDHHC15Q96MV8 337 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 PDGFDQ9GZP0 370 aaPredicted RBP20.43■□□□□ 0.86
CTSB-204ENST00000453527 CBX8Q9HC52 389 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 RRAGDQ9NQL2 400 aaPredicted RBP20.43■□□□□ 0.86
CTSB-204ENST00000453527 PCDHB6Q9Y5E3 794 aa20.43■□□□□ 0.86
CTSB-204ENST00000453527 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
CTSB-204ENST00000453527 SF3B2Q13435 895 aaKnown RBP20.42■□□□□ 0.86
CTSB-204ENST00000453527 TNFRSF25Q93038 417 aa20.42■□□□□ 0.86
CTSB-204ENST00000453527 TIGD1Q96MW7 591 aa20.42■□□□□ 0.86
CTSB-204ENST00000453527 CLIC6Q96NY7 704 aa20.42■□□□□ 0.86
CTSB-204ENST00000453527 CEP131Q9UPN4 1083 aa20.42■□□□□ 0.86
CTSB-204ENST00000453527 ADCY5O95622 1261 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms