RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 FUT2Q10981 343 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 RRP1BQ14684 758 aaKnown RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 PPP2R5BQ15173 497 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 RTN1Q16799 776 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 TBC1D10BQ4KMP7 808 aaPredicted RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 C9orf131Q5VYM1 1079 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 LARP1BQ659C4 914 aaKnown RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 SYNE3Q6ZMZ3 975 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 CDAN1Q8IWY9 1227 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 CEP95Q96GE4 821 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 CCDC17Q96LX7 622 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 TEPSINQ96N21 525 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 TMEM47Q9BQJ4 181 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 TMOD2Q9NZR1 351 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 RNF181Q9P0P0 153 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 PCDH10Q9P2E7 1040 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 PARP14Q460N5 1801 aa7.01□□□□□ -1.29
SDC4P-201ENST00000453285 WDR33Q9C0J8 1336 aaKnown RBP7.01□□□□□ -1.29
SDC4P-201ENST00000453285 PTPRFP10586 1907 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 UBE2Q2LH0YL09 131 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 H7C1D1 291 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 MYO1BO43795 1136 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 TBC1D12O60347 775 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 PPFIA3O75145 1194 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 BAG4O95429 457 aaKnown RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 FMNL1O95466 1100 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 F13A1P00488 732 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 CALM1P0DP23 149 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 CALM2P0DP24 149 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 CALM3P0DP25 149 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 PDCP20941 246 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 MCM4P33991 863 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 EPS15P42566 896 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 SHROOM1Q2M3G4 852 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 KIF4BQ2VIQ3 1234 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 CATIPQ7Z7H3 387 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 SIAH1Q8IUQ4 282 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 ZSCAN29Q8IWY8 852 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 CRACR2BQ8N4Y2 399 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 PNMA1Q8ND90 353 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 TRPM4Q8TD43 1214 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 NUP133Q8WUM0 1156 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 FOXD4L4Q8WXT5 416 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 PHKBQ93100 1093 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 CHAMP1Q96JM3 812 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 CSRNP1Q96S65 589 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 MAP3K14Q99558 947 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 TMEM39BQ9GZU3 492 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 KAT14Q9H8E8 782 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 VEZTQ9HBM0 779 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 MTMR4Q9NYA4 1195 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 ORC3Q9UBD5 711 aaPredicted RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 HERC5Q9UII4 1024 aaKnown RBP7□□□□□ -1.29
SDC4P-201ENST00000453285 HACL1Q9UJ83 578 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 PAPPA2Q9BXP8 1791 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 STK36Q9NRP7 1315 aa7□□□□□ -1.29
SDC4P-201ENST00000453285 WDR90Q96KV7 1748 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 OTOFQ9HC10 1997 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CCDC196A0A1B0GTZ2 297 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 PALM3A6NDB9 673 aaPredicted RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CPLX1O14810 134 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 PLEKHA8P1O95397 391 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 TOP1P11387 765 aaKnown RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 YY1P25490 414 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 TNNI2P48788 182 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 RASA3Q14644 834 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 GRM4Q14833 912 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 PKN1Q16512 942 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 SLC35G1Q2M3R5 365 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CERKLQ49MI3 558 aaPredicted RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CPLX2Q6PUV4 134 aaKnown RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 TMTC3Q6ZXV5 915 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CDC37L1Q7L3B6 337 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CLEC10AQ8IUN9 316 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CMTR1Q8N1G2 835 aaKnown RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 STAG2Q8N3U4 1231 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 SRBD1Q8N5C6 995 aaKnown RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 FAM184AQ8NB25 1140 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 MKL1Q969V6 931 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 AIFM3Q96NN9 605 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 RBM28Q9NW13 759 aaKnown RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 MAD2L2Q9UI95 211 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 STX8Q9UNK0 236 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 SCAF8Q9UPN6 1271 aaKnown RBP6.99□□□□□ -1.29
SDC4P-201ENST00000453285 CNTNAP5Q8WYK1 1306 aa6.99□□□□□ -1.29
SDC4P-201ENST00000453285 MYH7BA7E2Y1 1941 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 RLFQ13129 1914 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 VPS37CA5D8V6 355 aaPredicted RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 PHF20L1A8MW92 1017 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 PRPF3O43395 683 aaKnown RBP6.98□□□□□ -1.29
SDC4P-201ENST00000453285 GRIN3BO60391 1043 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 CDKL5O76039 1030 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 GDF11O95390 407 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 TTLL1O95922 423 aa6.98□□□□□ -1.29
SDC4P-201ENST00000453285 SNHG28P0DPA3 235 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms