RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 NOD2Q9HC29 1040 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 CABP2Q9NPB3 220 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 SWAP70Q9UH65 585 aa9.39□□□□□ -0.91
SMCO1-202ENST00000452776 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 OVOS2A0A0G2JMS6 1433 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 OVOS2A0A0J9YW53 1432 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 A6NHS1 94 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 RASSF10A6NK89 507 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 B4DLN1 442 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 PDHBP11177 359 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 PRLRP16471 622 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CCND1P24385 295 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CCNG1P51959 295 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 SAFB2Q14151 953 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 HHATQ5VTY9 493 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 OVOS2Q6IE36 1432 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 RAD9BQ6WBX8 426 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 ZNF572Q7Z3I7 529 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 SPATA21Q7Z572 469 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 FAM228AQ86W67 206 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 NSUN7Q8NE18 718 aaKnown RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 ATRIPQ8WXE1 791 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 RIN2Q8WYP3 895 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 THOC1Q96FV9 657 aaKnown RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 MMTAG2Q9BU76 263 aaKnown RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 SLC39A2Q9NP94 309 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 INCENPQ9NQS7 918 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 ANKIB1Q9P2G1 1089 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 PCDHGC5Q9Y5F6 944 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CRYBG1Q9Y4K1 1723 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 LRRD1A4D1F6 860 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 MFAP3LO75121 409 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 ANP32DO95626 131 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 PFKFB1P16118 471 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 ABCD1P33897 745 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 PEX19P40855 299 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 SCTRP47872 440 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CD151P48509 253 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 PDCLQ13371 301 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 E2F5Q15329 346 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 NFXL1Q6ZNB6 911 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 Q6ZUG5 572 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 SND1Q7KZF4 910 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 NCAPG2Q86XI2 1143 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CACNA2D3Q8IZS8 1091 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CAGE1Q8TC20 777 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 LZICQ8WZA0 190 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CNKSR1Q969H4 720 aa9.38□□□□□ -0.91
SMCO1-202ENST00000452776 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 CWC25Q9NXE8 425 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-202ENST00000452776 ABCC6O95255 1503 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 TULP4Q9NRJ4 1543 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 PTPDC1A2A3K4 754 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 ENO4A6NNW6 628 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 PPP1R12BO60237 982 aaPredicted RBP9.37□□□□□ -0.91
SMCO1-202ENST00000452776 VIMP08670 466 aaKnown RBP9.37□□□□□ -0.91
SMCO1-202ENST00000452776 NR1D1P20393 614 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 VAV2P52735 878 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 RBM5P52756 815 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMCO1-202ENST00000452776 ELF3P78545 371 aaPredicted RBP9.37□□□□□ -0.91
SMCO1-202ENST00000452776 CUL3Q13618 768 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 SLC39A14Q15043 492 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 DBN1Q16643 649 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 IFI16Q16666 785 aaKnown RBP9.37□□□□□ -0.91
SMCO1-202ENST00000452776 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
SMCO1-202ENST00000452776 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 PPP1R42Q7Z4L9 355 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 MREGQ8N565 214 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 ANKS4BQ8N8V4 417 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 INTS13Q9NVM9 706 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 BABAM1Q9NWV8 329 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 ZFATQ9P243 1243 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 HPSEQ9Y251 543 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 JCADQ9P266 1359 aa9.37□□□□□ -0.91
SMCO1-202ENST00000452776 A0A087WWV3 80 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 FRMD3A2A2Y4 597 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 E7EVH7 732 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 KRT86O43790 486 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 SMIM24O75264 130 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 NPTXRO95502 500 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 MRPS35P82673 323 aaKnown RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 FLIIQ13045 1269 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 CMPK2Q5EBM0 449 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 NT5DC1Q5TFE4 455 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 GKAP1Q5VSY0 366 aaPredicted RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 LRIG3Q6UXM1 1119 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
SMCO1-202ENST00000452776 IFT20Q8IY31 132 aa9.36□□□□□ -0.91
SMCO1-202ENST00000452776 FBXL16Q8N461 479 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms