RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TXNRD2Q9NNW7 524 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 EMILIN3Q9NT22 766 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 OGDHLQ9ULD0 1010 aa13.26□□□□□ -0.29
USP1-204ENST00000452143 ZNF236Q9UL36 1845 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 ZKSCAN1P17029 563 aaPredicted RBP13.25□□□□□ -0.29
USP1-204ENST00000452143 RGS2P41220 211 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 USP14P54578 494 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 HSP90AB4PQ58FF6 505 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 CCAR1Q8IX12 1150 aaKnown RBP13.25□□□□□ -0.29
USP1-204ENST00000452143 DIS3LQ8TF46 1054 aaKnown RBP13.25□□□□□ -0.29
USP1-204ENST00000452143 APBA2Q99767 749 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
USP1-204ENST00000452143 CYP2B6P20813 491 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 CCNA1P78396 465 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 TRIM32Q13049 653 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
USP1-204ENST00000452143 GPR142Q7Z601 462 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 AACSQ86V21 672 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 USP6NLQ92738 828 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 PAGR1Q9BTK6 254 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 KIAA1683Q9H0B3 1180 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 C11orf49Q9H6J7 331 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 RABGAP1Q9Y3P9 1069 aa13.24□□□□□ -0.29
USP1-204ENST00000452143 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
USP1-204ENST00000452143 VCAM1P19320 739 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
USP1-204ENST00000452143 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 ABCB5Q2M3G0 1257 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
USP1-204ENST00000452143 MORN1Q5T089 497 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 PLEKHH3Q7Z736 793 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 RIOK1Q9BRS2 568 aaKnown RBP13.23□□□□□ -0.29
USP1-204ENST00000452143 PORCNQ9H237 461 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 ANTXR1Q9H6X2 564 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 MYH7P12883 1935 aa13.23□□□□□ -0.29
USP1-204ENST00000452143 COL6A3P12111 3177 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 PEX10O60683 326 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 BMP8BP34820 402 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 C7orf61Q8IZ16 206 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 GDF15Q99988 308 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 CWC22Q9HCG8 908 aaKnown RBP13.22□□□□□ -0.29
USP1-204ENST00000452143 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 NDUFB9Q9Y6M9 179 aa13.22□□□□□ -0.29
USP1-204ENST00000452143 CUL9Q8IWT3 2517 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 PARP14Q460N5 1801 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 MAGEB6P1A0A0J9YX57 407 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 MS4A1P11836 297 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 SHMT1P34896 483 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 CACNB2Q08289 660 aaPredicted RBP13.21□□□□□ -0.29
USP1-204ENST00000452143 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
USP1-204ENST00000452143 Q3C1V9 767 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 POTEEQ6S8J3 1075 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 CATSPERGQ6ZRH7 1159 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP1-204ENST00000452143 CRNKL1Q9BZJ0 848 aaKnown RBP13.21□□□□□ -0.29
USP1-204ENST00000452143 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
USP1-204ENST00000452143 RLFQ13129 1914 aa13.21□□□□□ -0.3
USP1-204ENST00000452143 PFASO15067 1338 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 CNMDO75829 334 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 COL6A1P12109 1028 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 PDE6AP16499 860 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 PLCD1P51178 756 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 GABPAQ06546 454 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 CLASRPQ8N2M8 674 aaKnown RBP13.2□□□□□ -0.3
USP1-204ENST00000452143 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
USP1-204ENST00000452143 BAZ2AQ9UIF9 1905 aaKnown RBP13.19□□□□□ -0.3
USP1-204ENST00000452143 SLC15A5A6NIM6 579 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
USP1-204ENST00000452143 MSCO60682 206 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 HMMRO75330 724 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
USP1-204ENST00000452143 HOXC6P09630 235 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 GRB14Q14449 540 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 CCL14Q16627 93 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 EDC3Q96F86 508 aaKnown RBP13.19□□□□□ -0.3
USP1-204ENST00000452143 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
USP1-204ENST00000452143 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
USP1-204ENST00000452143 IVNS1ABPQ9Y6Y0 642 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms