RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SP3Q02447 781 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-203ENST00000452013 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 CASC1Q6TDU7 716 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
COL8A1-203ENST00000452013 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-203ENST00000452013 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
COL8A1-203ENST00000452013 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 PRDM1O75626 825 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 TSPY3P0CV98 308 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 TSPY8P0CW00 308 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 HOXA7P31268 230 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-203ENST00000452013 NT5C2P49902 561 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 TFAP4Q01664 338 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 ATP2B2Q01814 1243 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 ICA1Q05084 483 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 CTDSPL2Q05D32 466 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 KIF22Q14807 665 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
COL8A1-203ENST00000452013 MFSD6Q6ZSS7 791 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 ZNF296Q8WUU4 475 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-203ENST00000452013 ERO1AQ96HE7 468 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 C12orf42Q96LP6 360 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 R3HDMLQ9H3Y0 253 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 DOCK2Q92608 1830 aa10.53□□□□□ -0.72
COL8A1-203ENST00000452013 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.72
COL8A1-203ENST00000452013 TSPY2A6NKD2 308 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L15C9J2P7 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L13C9JLJ4 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L11C9JVI0 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L18D6R9N7 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L22D6RA61 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L17D6RBQ6 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L19D6RCP7 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L20D6RJB6 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 SGSM2O43147 1006 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 ORC4O43929 436 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 FGRP09769 529 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 EEF2P13639 858 aaKnown RBP10.52□□□□□ -0.73
COL8A1-203ENST00000452013 IRX3P78415 501 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-203ENST00000452013 USP17L24Q0WX57 530 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 ZYXQ15942 572 aaKnown RBP10.52□□□□□ -0.73
COL8A1-203ENST00000452013 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 C17orf99Q6UX52 265 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 SIAH1Q8IUQ4 282 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 NEDD1Q8NHV4 660 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 SMCR8Q8TEV9 937 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-203ENST00000452013 LPAR1Q92633 364 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 ANP32EQ9BTT0 268 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 TOMM22Q9NS69 142 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 NYAP2Q9P242 653 aa10.52□□□□□ -0.73
COL8A1-203ENST00000452013 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 A0A1W2PRG0 241 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 CDC45O75419 566 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 CYP2C8P10632 490 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 HAND2P61296 217 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 FAM47AQ5JRC9 791 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 GTF3C2Q8WUA4 911 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 MKL1Q969V6 931 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 ASCC2Q9H1I8 757 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 GOPCQ9HD26 462 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 HOXC10Q9NYD6 342 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 CLIP2Q9UDT6 1046 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 CPA4Q9UI42 421 aa10.51□□□□□ -0.73
COL8A1-203ENST00000452013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
COL8A1-203ENST00000452013 IGKV6D-41A0A0C4DH26 115 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 TTLL1O95922 423 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 PKN2Q16513 984 aaKnown RBP10.5□□□□□ -0.73
COL8A1-203ENST00000452013 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
COL8A1-203ENST00000452013 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 CTU1Q7Z7A3 348 aaKnown RBP10.5□□□□□ -0.73
COL8A1-203ENST00000452013 STAG1Q8WVM7 1258 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 ESR2Q92731 530 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 P2RX7Q99572 595 aaKnown RBP10.5□□□□□ -0.73
COL8A1-203ENST00000452013 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 VCPKMTQ9H867 229 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 INCENPQ9NQS7 918 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 MTMR4Q9NYA4 1195 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 SYNPO2Q9UMS6 1093 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 CEP350Q5VT06 3117 aa10.5□□□□□ -0.73
COL8A1-203ENST00000452013 F5H6K3 240 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 RAD21O60216 631 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 GNRH1P01148 92 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 VCAM1P19320 739 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 HOXD10P28358 340 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 PTH1RQ03431 593 aa10.49□□□□□ -0.73
COL8A1-203ENST00000452013 KLRC3Q07444 240 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms