RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 CNOT7Q9UIV1 285 aaKnown RBP13.1□□□□□ -0.31
NDUFA3-209ENST00000451517 DICER1Q9UPY3 1922 aaKnown RBP13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 NBR1Q14596 966 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 TATDN1Q6P1N9 297 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 CDC37L1Q7L3B6 337 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 GPC2Q8N158 579 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 PNMA1Q8ND90 353 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
NDUFA3-209ENST00000451517 H3BQV1 296 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 EGFRP00533 1210 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 SLURP2P0DP57 97 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 FUT2Q10981 343 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 IFFO2Q5TF58 517 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 TMTC3Q6ZXV5 915 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 PHKBQ93100 1093 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 PGAP2Q9UHJ9 254 aa13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
NDUFA3-209ENST00000451517 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 RESTQ13127 1097 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 GRM4Q14833 912 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 CERKLQ49MI3 558 aaPredicted RBP13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 CTCFLQ8NI51 663 aaPredicted RBP13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 ANP32EQ9BTT0 268 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 SLC26A6Q9BXS9 759 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 TRIM34Q9BYJ4 488 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 STX8Q9UNK0 236 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 ATP6V1DQ9Y5K8 247 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 SBF1O95248 1867 aa13.07□□□□□ -0.32
NDUFA3-209ENST00000451517 FAM196BA6NMK8 535 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 H7C1D1 291 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 TBC1D12O60347 775 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 DEXIO95424 95 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 PTMSP20962 102 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 KIF5BP33176 963 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 TNNI2P48788 182 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 KIF4BQ2VIQ3 1234 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 TBC1D10BQ4KMP7 808 aaPredicted RBP13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 FBXO18Q8NFZ0 1043 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 WASF1Q92558 559 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
NDUFA3-209ENST00000451517 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 PRPF3O43395 683 aaKnown RBP13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 TTLL1O95922 423 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 GNAQP50148 359 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 FOSBP53539 338 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 MAP3K10Q02779 954 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 TNFAIP1Q13829 316 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 TMEM179Q6ZVK1 233 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 FERMT3Q86UX7 667 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 CMTR1Q8N1G2 835 aaKnown RBP13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 CHAMP1Q96JM3 812 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 TMEM39BQ9GZU3 492 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
NDUFA3-209ENST00000451517 MYH8P13535 1937 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 RASA3Q14644 834 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 RRP1BQ14684 758 aaKnown RBP13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 ABCB5Q2M3G0 1257 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 AIFM3Q96NN9 605 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
NDUFA3-209ENST00000451517 UBE2Q2LH0YL09 131 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 GUCY1B3Q02153 619 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 PKN1Q16512 942 aa13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 SHROOM1Q2M3G4 852 aaPredicted RBP13.03□□□□□ -0.32
NDUFA3-209ENST00000451517 KRT40Q6A162 431 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms