RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 MMS19Q96T76 1030 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 JADE2Q9NQC1 790 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 POLR3EQ9NVU0 708 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 RABL6Q3YEC7 729 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 USP49Q70CQ1 688 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 SCLT1Q96NL6 688 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 GOLGA6BA6NDN3 693 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 N4BP3O15049 544 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 ZPR1O75312 459 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 HMGB1P09429 215 aaKnown RBP13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 IRAK1P51617 712 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 KRT40Q6A162 431 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 JMYQ8N9B5 988 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 CAPS2Q9BXY5 557 aa13.6□□□□□ -0.23
RAB11FIP3-205ENST00000450428 MACROD2A1Z1Q3 448 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 PPARAQ07869 468 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 SLC39A14Q15043 492 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 POSTNQ15063 836 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 RRP36Q96EU6 259 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 GNL3LQ9NVN8 582 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 SMARCAL1Q9NZC9 954 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 HPCAL4Q9UM19 191 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 COL18A1P39060 1754 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 BACH1O14867 736 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 RPSAP08865 295 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 DDB1Q16531 1140 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 MED4Q9NPJ6 270 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 INCENPQ9NQS7 918 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
RAB11FIP3-205ENST00000450428 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 HLFQ16534 295 aa13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 AIDAQ96BJ3 306 aa13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 CHP1Q99653 195 aa13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 SLC26A6Q9BXS9 759 aa13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 ZBTB1Q9Y2K1 713 aa13.58□□□□□ -0.23
RAB11FIP3-205ENST00000450428 ATP5JP18859 108 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CASP7P55210 303 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 KIAA1328Q86T90 577 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 EYA2O00167 538 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 ATP1A1P05023 1023 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 USP8P40818 1118 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 EZH2Q15910 746 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 FILIP1LQ4L180 1135 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 USPL1Q5W0Q7 1092 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CDHR2Q9BYE9 1310 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 M0R2C6 588 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CNPY4Q8N129 248 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 HNRNPLLQ8WVV9 542 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 SELENOOQ9BVL4 669 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 TUBE1Q9UJT0 475 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 KRT9P35527 623 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 EXOSC10Q01780 885 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 TBX2Q13207 712 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 BLZF1Q9H2G9 400 aa13.57□□□□□ -0.24
RAB11FIP3-205ENST00000450428 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 RNF225M0QZC1 329 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CXCR5P32302 372 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CCDC122Q5T0U0 273 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 NOC3LQ8WTT2 800 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CNNM1Q9NRU3 951 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 CTNND2Q9UQB3 1225 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 BTBD18B2RXH4 712 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 NF2P35240 595 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 METAP2P50579 478 aaKnown RBP eCLIP13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 ATG9AQ7Z3C6 839 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
RAB11FIP3-205ENST00000450428 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
RAB11FIP3-205ENST00000450428 HPDP32754 393 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP3-205ENST00000450428 USP5P45974 858 aa13.55□□□□□ -0.24
RAB11FIP3-205ENST00000450428 ERVK-24P63145 666 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms