RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 HERVK_113P62684 666 aa16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 Q3C1V9 767 aa16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
SMARCD2-204ENST00000450364 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 TNPO2O14787 897 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 ELNP15502 786 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 HOXD10P28358 340 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.235e-7■■■□□ 18.3
SMARCD2-204ENST00000450364 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 RAET1EQ8TD07 263 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 GJD2Q9UKL4 321 aa16.5■□□□□ 0.23
SMARCD2-204ENST00000450364 A0A0G2JMZ2 1700 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 VCAM1P19320 739 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 CDK8P49336 464 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 IRF5Q13568 498 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 ZSCAN25Q6NSZ9 544 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 APPBP2Q92624 585 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
SMARCD2-204ENST00000450364 FOXP2O15409 715 aa16.48■□□□□ 0.23
SMARCD2-204ENST00000450364 MX1P20591 662 aa16.48■□□□□ 0.23
SMARCD2-204ENST00000450364 CATSPERGQ6ZRH7 1159 aa16.48■□□□□ 0.23
SMARCD2-204ENST00000450364 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
SMARCD2-204ENST00000450364 PORCNQ9H237 461 aa16.48■□□□□ 0.23
SMARCD2-204ENST00000450364 PDE4DIPQ5VU43 2346 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 MPHOSPH10O00566 681 aaKnown RBP16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 GPAA1O43292 621 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 ADCY3O60266 1144 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 IGHDP01880 384 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 CCL5P13501 91 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 SLAIN1Q8ND83 568 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 FEZ1Q99689 392 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 UNC93B1Q9H1C4 597 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 CABP5Q9NP86 173 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 SWAP70Q9UH65 585 aa16.47■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L15C9J2P7 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L13C9JLJ4 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L11C9JVI0 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L18D6R9N7 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L22D6RA61 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L17D6RBQ6 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L19D6RCP7 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L20D6RJB6 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 INHAP05111 366 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 ERVK-24P63145 666 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 USP17L24Q0WX57 530 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 TRIM32Q13049 653 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 SBK1Q52WX2 424 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 TMEM179Q6ZVK1 233 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 PXYLP1Q8TE99 480 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.23
SMARCD2-204ENST00000450364 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 USP14P54578 494 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 USP6NLQ92738 828 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 COA7Q96BR5 231 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
SMARCD2-204ENST00000450364 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 RASA1P20936 1047 aa16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 PDE1AP54750 535 aa16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 LBX2Q6XYB7 198 aa16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
SMARCD2-204ENST00000450364 ERC2O15083 957 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 GJB1P08034 283 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 GJA8P48165 433 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 ICA1Q05084 483 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 MORN1Q5T089 497 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 GIMAP6Q6P9H5 292 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 TRIB2Q92519 343 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 FSD1Q9BTV5 496 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 RNF208Q9H0X6 261 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 TACC3Q9Y6A5 838 aa16.43■□□□□ 0.22
SMARCD2-204ENST00000450364 EEF2P13639 858 aaKnown RBP16.42■□□□□ 0.22
SMARCD2-204ENST00000450364 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms