RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ZNF532Q9HCE3 1301 aa21.2■□□□□ 0.98
FAM3A-216ENST00000449971 LAMA2P24043 3122 aaKnown RBP21.2■□□□□ 0.98
FAM3A-216ENST00000449971 MAST2Q6P0Q8 1798 aa21.19■□□□□ 0.98
FAM3A-216ENST00000449971 HLA-DOAP06340 250 aa21.19■□□□□ 0.98
FAM3A-216ENST00000449971 LRIT3Q3SXY7 679 aa21.19■□□□□ 0.98
FAM3A-216ENST00000449971 GPR153Q6NV75 609 aa21.19■□□□□ 0.98
FAM3A-216ENST00000449971 NUDT12Q9BQG2 462 aa21.19■□□□□ 0.98
FAM3A-216ENST00000449971 ECHDC1Q9NTX5 307 aa21.19■□□□□ 0.98
FAM3A-216ENST00000449971 GPATCH3Q96I76 525 aa21.18■□□□□ 0.98
FAM3A-216ENST00000449971 P2RX7Q99572 595 aaKnown RBP21.18■□□□□ 0.98
FAM3A-216ENST00000449971 RIOK1Q9BRS2 568 aaKnown RBP21.18■□□□□ 0.98
FAM3A-216ENST00000449971 PAGR1Q9BTK6 254 aa21.18■□□□□ 0.98
FAM3A-216ENST00000449971 TXNRD2Q9NNW7 524 aa21.18■□□□□ 0.98
FAM3A-216ENST00000449971 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
FAM3A-216ENST00000449971 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
FAM3A-216ENST00000449971 GPRC5AQ8NFJ5 357 aa21.17■□□□□ 0.98
FAM3A-216ENST00000449971 FAM161BQ96MY7 647 aa21.17■□□□□ 0.98
FAM3A-216ENST00000449971 TBC1D2Q9BYX2 928 aa21.17■□□□□ 0.98
FAM3A-216ENST00000449971 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.17■□□□□ 0.981e-6■■■■□ 20.5
FAM3A-216ENST00000449971 CWC22Q9HCG8 908 aaKnown RBP21.17■□□□□ 0.98
FAM3A-216ENST00000449971 MORF4L1Q9UBU8 362 aa21.17■□□□□ 0.98
FAM3A-216ENST00000449971 LOC285556D6RIA3 1793 aa21.17■□□□□ 0.98
FAM3A-216ENST00000449971 MYO5AQ9Y4I1 1855 aaKnown RBP21.17■□□□□ 0.98
FAM3A-216ENST00000449971 ATAD5Q96QE3 1844 aa21.16■□□□□ 0.98
FAM3A-216ENST00000449971 TCRBV5S4A2TA0A5A2 114 aa21.16■□□□□ 0.98
FAM3A-216ENST00000449971 CCND3P30281 292 aaPredicted RBP21.16■□□□□ 0.98
FAM3A-216ENST00000449971 LRRC26Q2I0M4 334 aa21.16■□□□□ 0.98
FAM3A-216ENST00000449971 SHROOM1Q2M3G4 852 aaPredicted RBP21.16■□□□□ 0.98
FAM3A-216ENST00000449971 SOCS4Q8WXH5 440 aa21.16■□□□□ 0.98
FAM3A-216ENST00000449971 CRNKL1Q9BZJ0 848 aaKnown RBP21.16■□□□□ 0.98
FAM3A-216ENST00000449971 GDF11O95390 407 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 ADD2P35612 726 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 BACE1P56817 501 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 HERVK_113P62684 666 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 CACNB2Q08289 660 aaPredicted RBP21.15■□□□□ 0.98
FAM3A-216ENST00000449971 CCL14Q16627 93 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 SLFNL1Q499Z3 407 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 SH3D19Q5HYK7 790 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 TTC6Q86TZ1 520 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 METTL16Q86W50 562 aaKnown RBP21.15■□□□□ 0.98
FAM3A-216ENST00000449971 DNAJC18Q9H819 358 aa21.15■□□□□ 0.98
FAM3A-216ENST00000449971 PLXNB2O15031 1838 aa21.14■□□□□ 0.97
FAM3A-216ENST00000449971 MAP3K21Q5TCX8 1036 aa21.14■□□□□ 0.97
FAM3A-216ENST00000449971 TSHZ3Q63HK5 1081 aa21.14■□□□□ 0.97
FAM3A-216ENST00000449971 LCORLQ8N3X6 602 aa21.14■□□□□ 0.97
FAM3A-216ENST00000449971 PORCNQ9H237 461 aa21.14■□□□□ 0.97
FAM3A-216ENST00000449971 POLR3DP05423 398 aaPredicted RBP21.13■□□□□ 0.97
FAM3A-216ENST00000449971 JAG1P78504 1218 aa21.13■□□□□ 0.97
FAM3A-216ENST00000449971 Q3C1V9 767 aa21.13■□□□□ 0.97
FAM3A-216ENST00000449971 ZSCAN25Q6NSZ9 544 aa21.13■□□□□ 0.97
FAM3A-216ENST00000449971 ARMT1Q9H993 441 aa21.13■□□□□ 0.97
FAM3A-216ENST00000449971 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
FAM3A-216ENST00000449971 MBD4O95243 580 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 ASNSP08243 561 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 MAPK4P31152 587 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 ERVK-9P63128 1117 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 ERVK-24P63145 666 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 WDR78Q5VTH9 848 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 WDR18Q9BV38 432 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 COL25A1Q9BXS0 654 aaPredicted RBP21.12■□□□□ 0.97
FAM3A-216ENST00000449971 MCM9Q9NXL9 1143 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 RBPJLQ9UBG7 517 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 SERPINB13Q9UIV8 391 aa21.12■□□□□ 0.97
FAM3A-216ENST00000449971 CHGBP05060 677 aa21.11■□□□□ 0.97
FAM3A-216ENST00000449971 XRCC5P13010 732 aaKnown RBP21.11■□□□□ 0.97
FAM3A-216ENST00000449971 RGS2P41220 211 aa21.11■□□□□ 0.97
FAM3A-216ENST00000449971 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
FAM3A-216ENST00000449971 ZYXQ15942 572 aaKnown RBP21.11■□□□□ 0.97
FAM3A-216ENST00000449971 ANKRD45Q5TZF3 282 aa21.11■□□□□ 0.97
FAM3A-216ENST00000449971 GPR142Q7Z601 462 aa21.11■□□□□ 0.97
FAM3A-216ENST00000449971 SDR42E1Q8WUS8 393 aa21.11■□□□□ 0.97
FAM3A-216ENST00000449971 LBHD1Q9BQE6 289 aaPredicted RBP21.11■□□□□ 0.97
FAM3A-216ENST00000449971 SENP6Q9GZR1 1112 aaPredicted RBP21.11■□□□□ 0.97
FAM3A-216ENST00000449971 USP17L10C9JJH3 530 aa21.1■□□□□ 0.97
FAM3A-216ENST00000449971 COL6A1P12109 1028 aa21.1■□□□□ 0.97
FAM3A-216ENST00000449971 HOXA7P31268 230 aaPredicted RBP21.1■□□□□ 0.97
FAM3A-216ENST00000449971 PLCD1P51178 756 aa21.1■□□□□ 0.97
FAM3A-216ENST00000449971 ATN1P54259 1190 aaPredicted RBP21.1■□□□□ 0.97
FAM3A-216ENST00000449971 PLEKHH3Q7Z736 793 aa21.1■□□□□ 0.97
FAM3A-216ENST00000449971 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.1■□□□□ 0.97
FAM3A-216ENST00000449971 TRMT44Q8IYL2 757 aaKnown RBP21.1■□□□□ 0.97
FAM3A-216ENST00000449971 EHD4Q9H223 541 aa21.1■□□□□ 0.97
FAM3A-216ENST00000449971 GINM1Q9NU53 330 aa21.1■□□□□ 0.97
FAM3A-216ENST00000449971 EYSQ5T1H1 3165 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 PRKAB2O43741 272 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 CNGA1P29973 690 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 HDAC1Q13547 482 aaPredicted RBP21.09■□□□□ 0.97
FAM3A-216ENST00000449971 AAMPQ13685 434 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 LHX8Q68G74 356 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 OTUD7AQ8TE49 926 aaPredicted RBP21.09■□□□□ 0.97
FAM3A-216ENST00000449971 APBA2Q99767 749 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 DCP1AQ9NPI6 582 aaPredicted RBP21.09■□□□□ 0.97
FAM3A-216ENST00000449971 ZBTB21Q9ULJ3 1066 aa21.09■□□□□ 0.97
FAM3A-216ENST00000449971 TTC41PQ6P2S7 1318 aa21.08■□□□□ 0.97
FAM3A-216ENST00000449971 C19orf81C9J6K1 198 aa21.08■□□□□ 0.97
FAM3A-216ENST00000449971 ERC2O15083 957 aa21.08■□□□□ 0.97
FAM3A-216ENST00000449971 GH2P01242 217 aa21.08■□□□□ 0.97
FAM3A-216ENST00000449971 TATDN1Q6P1N9 297 aa21.08■□□□□ 0.97
FAM3A-216ENST00000449971 KBTBD3Q8NAB2 608 aa21.08■□□□□ 0.97
FAM3A-216ENST00000449971 GUCD1Q96NT3 240 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms