RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
SYVN1-204ENST00000449943 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
SYVN1-204ENST00000449943 FAM53CQ9NYF3 392 aa12.88□□□□□ -0.35
SYVN1-204ENST00000449943 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 ZNF34Q8IZ26 560 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 ATRIPQ8WXE1 791 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 SOS2Q07890 1332 aaPredicted RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 GOLGA6L9A6NEM1 432 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 WNT7AO00755 349 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 RAD21O60216 631 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CCT6AP40227 531 aaKnown RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 GYG1P46976 350 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 RBL2Q08999 1139 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CHRNDQ07001 517 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 DYNLL1P63167 89 aaKnown RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 NT5DC1Q5TFE4 455 aa12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
SYVN1-204ENST00000449943 CCDC175P0C221 793 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 NR1I3Q14994 352 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
SYVN1-204ENST00000449943 PAGE5Q96GU1 130 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
SYVN1-204ENST00000449943 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
SYVN1-204ENST00000449943 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
SYVN1-204ENST00000449943 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
SYVN1-204ENST00000449943 MRFAP1Q9Y605 127 aa12.86□□□□□ -0.35
SYVN1-204ENST00000449943 SF3B2Q13435 895 aaKnown RBP12.85□□□□□ -0.35
SYVN1-204ENST00000449943 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-204ENST00000449943 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-204ENST00000449943 TPM1P09493 284 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 RAD9BQ6WBX8 426 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 A0A1B0GTH6 734 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-204ENST00000449943 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 FILIP1LQ4L180 1135 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 SPATA1Q5VX52 437 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 ELOA2Q8IYF1 753 aaPredicted RBP12.85□□□□□ -0.35
SYVN1-204ENST00000449943 AATFQ9NY61 560 aaKnown RBP eCLIP12.85□□□□□ -0.35
SYVN1-204ENST00000449943 MAPK8IP1Q9UQF2 711 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
SYVN1-204ENST00000449943 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
SYVN1-204ENST00000449943 CASP14P31944 242 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 PKN1Q16512 942 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 CCDC47Q96A33 483 aaKnown RBP12.84□□□□□ -0.35
SYVN1-204ENST00000449943 EVX2Q03828 476 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 SEC23AQ15436 765 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 PARD6BQ9BYG5 372 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
SYVN1-204ENST00000449943 BCL9O00512 1426 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 NMT2O60551 498 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 SASH3O75995 380 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 MCM7P33993 719 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 TTC38Q5R3I4 469 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 GOLGA1Q92805 767 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 LRP6O75581 1613 aa12.84□□□□□ -0.35
SYVN1-204ENST00000449943 KIF5CO60282 957 aa12.83□□□□□ -0.35
SYVN1-204ENST00000449943 PTGDRQ13258 359 aa12.83□□□□□ -0.35
SYVN1-204ENST00000449943 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.35
SYVN1-204ENST00000449943 PIK3AP1Q6ZUJ8 805 aa12.83□□□□□ -0.35
SYVN1-204ENST00000449943 IQCA1Q86XH1 822 aa12.83□□□□□ -0.35
SYVN1-204ENST00000449943 PHF20Q9BVI0 1012 aa12.83□□□□□ -0.35
SYVN1-204ENST00000449943 VPS16Q9H269 839 aa12.83□□□□□ -0.35
SYVN1-204ENST00000449943 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
SYVN1-204ENST00000449943 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
SYVN1-204ENST00000449943 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 ACRBPQ8NEB7 543 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 ARFGAP3Q9NP61 516 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 OAS2P29728 719 aaKnown RBP12.83□□□□□ -0.36
SYVN1-204ENST00000449943 CDC25AP30304 524 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 NLRP5P59047 1200 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 KIF4BQ2VIQ3 1234 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 ADGRG1Q9Y653 693 aa12.83□□□□□ -0.36
SYVN1-204ENST00000449943 NID2Q14112 1375 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms