RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 IFNAR1P17181 557 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 NCLP19338 710 aaKnown RBP11.25□□□□□ -0.61
RFC4-210ENST00000449502 CDC27P30260 824 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 SHMT1P34896 483 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 PRELPP51888 382 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 GNL2Q13823 731 aaKnown RBP11.25□□□□□ -0.61
RFC4-210ENST00000449502 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFC4-210ENST00000449502 ABCB5Q2M3G0 1257 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 NBPF9Q3BBW0 867 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
RFC4-210ENST00000449502 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 ZSCAN16Q9H4T2 348 aaPredicted RBP11.25□□□□□ -0.61
RFC4-210ENST00000449502 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 KIAA1551Q9HCM1 1747 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 CCDC88AQ3V6T2 1871 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 DEXIO95424 95 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 YBX3P16989 372 aaKnown RBP eCLIP11.24□□□□□ -0.613e-7■■□□□ 11.9
RFC4-210ENST00000449502 TROAPQ12815 778 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 RASA3Q14644 834 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
RFC4-210ENST00000449502 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
RFC4-210ENST00000449502 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
RFC4-210ENST00000449502 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 PHKBQ93100 1093 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 MAP3K14Q99558 947 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 KANSL2Q9H9L4 492 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
RFC4-210ENST00000449502 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 ISY1Q9ULR0 285 aaKnown RBP11.24□□□□□ -0.61
RFC4-210ENST00000449502 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 NID2Q14112 1375 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
RFC4-210ENST00000449502 COL2A1P02458 1487 aaPredicted RBP11.24□□□□□ -0.61
RFC4-210ENST00000449502 MYO5AQ9Y4I1 1855 aaKnown RBP11.23□□□□□ -0.61
RFC4-210ENST00000449502 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 FAM196BA6NMK8 535 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 RAD21O60216 631 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 PARP1P09874 1014 aaKnown RBP11.23□□□□□ -0.61
RFC4-210ENST00000449502 GRM4Q14833 912 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 CLEC17AQ6ZS10 378 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 TMTC3Q6ZXV5 915 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 RNF26Q9BY78 433 aaPredicted RBP11.23□□□□□ -0.61
RFC4-210ENST00000449502 TMEM39BQ9GZU3 492 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
RFC4-210ENST00000449502 GPRC5DQ9NZD1 345 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 HACL1Q9UJ83 578 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 PLIN4Q96Q06 1357 aa11.23□□□□□ -0.61
RFC4-210ENST00000449502 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 PRPF3O43395 683 aaKnown RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 TBC1D12O60347 775 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 DDNO94850 711 aaPredicted RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 GDF11O95390 407 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 KRT85P78386 507 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 GUCY1B3Q02153 619 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 ICA1Q05084 483 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 TATDN1Q6P1N9 297 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 FERMT3Q86UX7 667 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 METTL16Q86W50 562 aaKnown RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 CMTR1Q8N1G2 835 aaKnown RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
RFC4-210ENST00000449502 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
RFC4-210ENST00000449502 CNTNAP1P78357 1384 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 PLEKHA8P1O95397 391 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 GH2P01242 217 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.61
RFC4-210ENST00000449502 NTRK3Q16288 839 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 SKOR2Q2VWA4 1001 aaPredicted RBP11.21□□□□□ -0.61
RFC4-210ENST00000449502 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 ANGEL2Q5VTE6 544 aaKnown RBP11.21□□□□□ -0.61
RFC4-210ENST00000449502 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 MIGA2Q7L4E1 593 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 FBXO18Q8NFZ0 1043 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 ANP32EQ9BTT0 268 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
RFC4-210ENST00000449502 DEFB129Q9H1M3 183 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 SH2D4AQ9H788 454 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
RFC4-210ENST00000449502 SEC63Q9UGP8 760 aaKnown RBP11.21□□□□□ -0.61
RFC4-210ENST00000449502 MYH2Q9UKX2 1941 aa11.21□□□□□ -0.62
RFC4-210ENST00000449502 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
RFC4-210ENST00000449502 EEF2P13639 858 aaKnown RBP11.2□□□□□ -0.62
RFC4-210ENST00000449502 EPS15P42566 896 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms