RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 KNDC1Q76NI1 1749 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 IFT88Q13099 833 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 PAK2Q13177 524 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMC6-207ENST00000448223 MAP3K21Q5TCX8 1036 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 KRT28Q7Z3Y7 464 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 ANKLE2Q86XL3 938 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 KCNG4Q8TDN1 519 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 EPSTI1Q96J88 318 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 PDE11AQ9HCR9 933 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 IGSF1Q8N6C5 1336 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 ALDH1L1O75891 902 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 EPHA10Q5JZY3 1008 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 TCP11Q8WWU5 503 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 SPDL1Q96EA4 605 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 KLHL14Q9P2G3 628 aa10.26□□□□□ -0.77
SMC6-207ENST00000448223 CDC42BPGQ6DT37 1551 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 AKR1B15C9JRZ8 316 aaPredicted RBP10.25□□□□□ -0.77
SMC6-207ENST00000448223 ANKRD20A3Q5VUR7 823 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 ARMCX6Q7L4S7 300 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 FBXO41Q8TF61 875 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 JAKMIP2Q96AA8 810 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 USP28Q96RU2 1077 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 FAM204AQ9H8W3 233 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 USP6P35125 1406 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 ZBTB22O15209 634 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 BAG2O95816 211 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 CETN1Q12798 172 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 TSGA10Q9BZW7 698 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 METTL24Q5JXM2 366 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 FBXO18Q8NFZ0 1043 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 GEMIN8Q9NWZ8 242 aaKnown RBP10.25□□□□□ -0.77
SMC6-207ENST00000448223 MX2P20592 715 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 HSPA1LP34931 641 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 PPARDQ03181 441 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
SMC6-207ENST00000448223 MYL10Q9BUA6 226 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 RMND1Q9NWS8 449 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 IMPACTQ9P2X3 320 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 BCAP29Q9UHQ4 241 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 DBNLQ9UJU6 430 aaKnown RBP10.25□□□□□ -0.77
SMC6-207ENST00000448223 FPGT-TNNI3KV9GXZ4 949 aa10.25□□□□□ -0.77
SMC6-207ENST00000448223 A1BGP04217 495 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 ATP1A2P50993 1020 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 PSMD7P51665 324 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 SKOR1P84550 965 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GNPTABQ3T906 1256 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 TCERG1LQ5VWI1 586 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 RRAGBQ5VZM2 374 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 ZNF790Q6PG37 636 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 PRPF31Q8WWY3 499 aaKnown RBP10.24□□□□□ -0.77
SMC6-207ENST00000448223 ATP2A3Q93084 1043 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 PRDM11Q9NQV5 511 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 SKIP12755 728 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GFAPP14136 432 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 ZSCAN25Q6NSZ9 544 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GNL3LQ9NVN8 582 aaKnown RBP10.24□□□□□ -0.77
SMC6-207ENST00000448223 PAG1Q9NWQ8 432 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 COMMD10Q9Y6G5 202 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.24□□□□□ -0.77
SMC6-207ENST00000448223 SALL3Q9BXA9 1300 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 AP5Z1O43299 807 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 MTMR3Q13615 1198 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 C11orf57Q6ZUT1 292 aaPredicted RBP10.24□□□□□ -0.77
SMC6-207ENST00000448223 TMEM87AQ8NBN3 555 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 SYNCQ9H7C4 482 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 EIF3CLB5ME19 914 aaKnown RBP10.24□□□□□ -0.77
SMC6-207ENST00000448223 ARHGAP6O43182 974 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 CYP21A2P08686 494 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 AMPD3Q01432 767 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GCKRQ14397 625 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GRAMD4Q6IC98 578 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 SEPT8Q92599 483 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 GDAP1L1Q96MZ0 367 aa10.24□□□□□ -0.77
SMC6-207ENST00000448223 EIF3CQ99613 913 aaKnown RBP10.24□□□□□ -0.77
SMC6-207ENST00000448223 ATP2B3Q16720 1220 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 KRT71Q3SY84 523 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 TTC19Q6DKK2 380 aaPredicted RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 CAPRIN2Q6IMN6 1127 aaKnown RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 DTNBP1Q96EV8 351 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 UBA5Q9GZZ9 404 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 CLSTN2Q9H4D0 955 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 ACTR5Q9H9F9 607 aaPredicted RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 TMEM2Q9UHN6 1383 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 ZNF213O14771 459 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
SMC6-207ENST00000448223 MAP4K1Q92918 833 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 POLA2Q14181 598 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 GSTA5Q7RTV2 222 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 FAM89AQ96GI7 184 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 CENPKQ9BS16 269 aa10.23□□□□□ -0.77
SMC6-207ENST00000448223 ABCF2Q9UG63 623 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms