RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 FOXP4Q8IVH2 680 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 FAM151AQ8WW52 585 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 MAP4K1Q92918 833 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 RIOK1Q9BRS2 568 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 LRRC2Q9BYS8 371 aa6.85□□□□□ -1.31
PROM1-201ENST00000447510 LSG1Q9H089 658 aaKnown RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 TAF1DQ9H5J8 278 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 COL11A2P13942 1736 aaPredicted RBP6.85□□□□□ -1.31
PROM1-201ENST00000447510 SPDYE2Q495Y8 402 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 FAM184AQ8NB25 1140 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 ANGEL1Q9UNK9 670 aaKnown RBP6.84□□□□□ -1.31
PROM1-201ENST00000447510 LAMB2P55268 1798 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 GAKO14976 1311 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 NRXN2Q9P2S2 1712 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 TFAP4Q01664 338 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 ARMC9Q7Z3E5 817 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 RGS22Q8NE09 1264 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 GLIS2Q9BZE0 524 aaPredicted RBP6.84□□□□□ -1.31
PROM1-201ENST00000447510 IRS2Q9Y4H2 1338 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 LOC102724159A0A0B4J2E5 919 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 GDF11O95390 407 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 IREB2P48200 963 aaKnown RBP6.84□□□□□ -1.31
PROM1-201ENST00000447510 STK3Q13188 491 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 PWP2Q15269 919 aaKnown RBP6.84□□□□□ -1.31
PROM1-201ENST00000447510 CAMK4Q16566 473 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 CTR9Q6PD62 1173 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 C2orf69Q8N8R5 385 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 GMLQ99445 158 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 KAT14Q9H8E8 782 aa6.84□□□□□ -1.31
PROM1-201ENST00000447510 RPAP1Q9BWH6 1393 aaPredicted RBP6.84□□□□□ -1.31
PROM1-201ENST00000447510 COL4A1P02462 1669 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 PRC1O43663 620 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 ZNF280AP59817 542 aaPredicted RBP6.84□□□□□ -1.32
PROM1-201ENST00000447510 ELF2Q15723 593 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 CCDC96Q2M329 555 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 TEX35Q5T0J7 233 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 SLC44A5Q8NCS7 719 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 DDX41Q9UJV9 622 aaKnown RBP6.84□□□□□ -1.32
PROM1-201ENST00000447510 ABT1Q9ULW3 272 aaKnown RBP6.84□□□□□ -1.32
PROM1-201ENST00000447510 ZDHHC9Q9Y397 364 aa6.84□□□□□ -1.32
PROM1-201ENST00000447510 COL1A1P02452 1464 aaPredicted RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 GOLGA6L4A6NEF3 574 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ADM5C9JUS6 153 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 E7EWF7 191 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 WDHD1O75717 1129 aaPredicted RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 EGFRP00533 1210 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CYP21A2P08686 494 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CDK8P49336 464 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 WTAPQ15007 396 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ZYXQ15942 572 aaKnown RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 ABCB5Q2M3G0 1257 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 IFIT1BQ5T764 474 aaKnown RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 KIAA1524Q8TCG1 905 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ANKRD7Q92527 254 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 SWAP70Q9UH65 585 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CPA1P15085 419 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ANKRD1Q15327 319 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CCDC178Q5BJE1 867 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 KIF18AQ8NI77 898 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 TMX3Q96JJ7 454 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 WRNIP1Q96S55 665 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 IL25Q9H293 177 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CNPY2Q9Y2B0 182 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 SNX14Q9Y5W7 946 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ASTN2O75129 1339 aaPredicted RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 HSPA4P34932 840 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 PLCD1P51178 756 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 RHBDL3P58872 404 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 ALX1Q15699 326 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CCDC183Q5T5S1 534 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 C12orf60Q5U649 245 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CATIPQ7Z7H3 387 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 RAB11FIP4Q86YS3 637 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CCDC17Q96LX7 622 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 TSPYL1Q9H0U9 437 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 EPB41L4AQ9HCS5 686 aaPredicted RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 DDX4Q9NQI0 724 aaKnown RBP6.83□□□□□ -1.32
PROM1-201ENST00000447510 SLC12A7Q9Y666 1083 aa6.83□□□□□ -1.32
PROM1-201ENST00000447510 CELF2O95319 508 aaKnown RBP6.82□□□□□ -1.32
PROM1-201ENST00000447510 MYCNP04198 464 aaPredicted RBP6.82□□□□□ -1.32
PROM1-201ENST00000447510 ANAPC15P60006 121 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 DHX32Q7L7V1 743 aaKnown RBP6.82□□□□□ -1.32
PROM1-201ENST00000447510 FAM83AQ86UY5 434 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 LDHDQ86WU2 507 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 ZFPM1Q8IX07 1006 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 ZNF384Q8TF68 577 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 ZC3H15Q8WU90 426 aaKnown RBP6.82□□□□□ -1.32
PROM1-201ENST00000447510 BRF1Q92994 677 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 RASSF4Q9H2L5 321 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 ARHGEF10LQ9HCE6 1279 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 INCENPQ9NQS7 918 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 ZNF215Q9UL58 517 aaPredicted RBP6.82□□□□□ -1.32
PROM1-201ENST00000447510 CHD4Q14839 1912 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 DDTLA6NHG4 134 aaPredicted RBP6.82□□□□□ -1.32
PROM1-201ENST00000447510 SMTNL1A8MU46 457 aa6.82□□□□□ -1.32
PROM1-201ENST00000447510 GYS2P54840 703 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms