RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ATP2B2Q01814 1243 aa21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 IQCA1Q86XH1 822 aa21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 CNKSR2Q8WXI2 1034 aa21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 ZSCAN10Q96SZ4 725 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 UBAC1Q9BSL1 405 aa21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 TNKSO95271 1327 aa21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 PTPRAP18433 802 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 HUNKP57058 714 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 ICA1Q05084 483 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 TMEM67Q5HYA8 995 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 ENAHQ8N8S7 591 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 SENP2Q9HC62 589 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 GINM1Q9NU53 330 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 TCP11L1Q9NUJ3 509 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 MTMR4Q9NYA4 1195 aa21.17■□□□□ 0.98
TRAPPC4-203ENST00000447216 TMEM88BA6NKF7 163 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 NT5C2P49902 561 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 NEK4P51957 841 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 SEC23AQ15436 765 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 RCSD1Q6JBY9 416 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 Q6ZUG5 572 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 SIAH1Q8IUQ4 282 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 IGDCC4Q8TDY8 1250 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 KANSL2Q9H9L4 492 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 PDRG1Q9NUG6 133 aa21.16■□□□□ 0.98
TRAPPC4-203ENST00000447216 WDR19Q8NEZ3 1342 aa21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 USP17L5A8MUK1 530 aa21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 SH2B2O14492 632 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 EEF2P13639 858 aaKnown RBP21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 ACER1Q8TDN7 264 aa21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 SLC10A4Q96EP9 437 aa21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 CLIP2Q9UDT6 1046 aa21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 STX8Q9UNK0 236 aa21.15■□□□□ 0.98
TRAPPC4-203ENST00000447216 WTAPQ15007 396 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 SART3Q15020 963 aaKnown RBP21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 RABEP1Q15276 862 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 SAPCD2Q86UD0 394 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 TMEM87BQ96K49 555 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 TTC14Q96N46 770 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 LY9Q9HBG7 655 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 ABT1Q9ULW3 272 aaKnown RBP21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 TLL2Q9Y6L7 1015 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 ZHX2Q9Y6X8 837 aa21.14■□□□□ 0.97
TRAPPC4-203ENST00000447216 A0A1W2PRG0 241 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 ERICH2A1L162 156 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 TTLL1O95922 423 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 GJA5P36382 358 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 ECE1P42892 770 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 FGD1P98174 961 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 CCDC178Q5BJE1 867 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 IFIT1BQ5T764 474 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 LRRC47Q8N1G4 583 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 OPTNQ96CV9 577 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 OTUD5Q96G74 571 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 TMEM47Q9BQJ4 181 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 LARP6Q9BRS8 491 aaKnown RBP21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 NYAP2Q9P242 653 aa21.13■□□□□ 0.97
TRAPPC4-203ENST00000447216 SPDYE5A6NIY4 337 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 UNCXA6NJT0 531 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 NOVP48745 357 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 APLP1P51693 650 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 SPP2Q13103 211 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 TOB2Q14106 344 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 ZYXQ15942 572 aaKnown RBP21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 NOL8Q76FK4 1167 aaKnown RBP21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 DGKHQ86XP1 1220 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 ERO1BQ86YB8 467 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 BRF1Q92994 677 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 CHMP4CQ96CF2 233 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 ARHGEF10LQ9HCE6 1279 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 MTMR7Q9Y216 660 aa21.12■□□□□ 0.97
TRAPPC4-203ENST00000447216 TRIM75PA6NK02 468 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 AK2P54819 239 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 APOBRQ0VD83 1088 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 MKRN3Q13064 507 aaKnown RBP21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 NFXL1Q6ZNB6 911 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 ANKS1AQ92625 1134 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 WNK4Q96J92 1243 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 FEZ1Q99689 392 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 MTA3Q9BTC8 594 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 WDR18Q9BV38 432 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 AS3MTQ9HBK9 375 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 AFG3L2Q9Y4W6 797 aa21.11■□□□□ 0.97
TRAPPC4-203ENST00000447216 TOP1P11387 765 aaKnown RBP21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 KCNA4P22459 653 aa21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 ZNF157P51786 506 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 PPATQ06203 517 aa21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 DGKZQ13574 1117 aa21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 RAB11FIP4Q86YS3 637 aa21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 ZNF280CQ8ND82 737 aa21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 KAT14Q9H8E8 782 aa21.1■□□□□ 0.97
TRAPPC4-203ENST00000447216 IRF6O14896 467 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 RAD21O60216 631 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 LIFRP42702 1097 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 PPIL2Q13356 520 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 MTMR2Q13614 643 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 PPP4R3BQ5MIZ7 849 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 RGMBQ6NW40 437 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 RASGRP2Q7LDG7 609 aa21.09■□□□□ 0.97
TRAPPC4-203ENST00000447216 RASAL3Q86YV0 1011 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms