RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 BIN2Q9UBW5 565 aaPredicted RBP12.06□□□□□ -0.48
LIN54-203ENST00000446851 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
LIN54-203ENST00000446851 CATIPQ7Z7H3 387 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 ZNF280CQ8ND82 737 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 CCDC17Q96LX7 622 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 UBA5Q9GZZ9 404 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 TNKSO95271 1327 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 KRT32Q14532 448 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 TMEM179Q6ZVK1 233 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
LIN54-203ENST00000446851 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
LIN54-203ENST00000446851 CNTNAP1P78357 1384 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 CCDC174Q6PII3 467 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 FER1L6Q2WGJ9 1857 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 KLF18A0A0U1RQI7 1052 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 SHMT1P34896 483 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 SNAPC2Q13487 334 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 SH2D4AQ9H788 454 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 GOLGA8BA8MQT2 603 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 CYP2C8P10632 490 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 RASA1P20936 1047 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 VEGFBP49765 207 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 Q6ZUG5 572 aa12.05□□□□□ -0.48
LIN54-203ENST00000446851 MYH13Q9UKX3 1938 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 PEX10O60683 326 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 PTPRAP18433 802 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 FAM83BQ5T0W9 1011 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 RASGRP2Q7LDG7 609 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 TBC1D8O95759 1140 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 TTLL1O95922 423 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
LIN54-203ENST00000446851 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
LIN54-203ENST00000446851 USP26Q9BXU7 913 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
LIN54-203ENST00000446851 ST18O60284 1047 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 RRP1BQ14684 758 aaKnown RBP12.03□□□□□ -0.48
LIN54-203ENST00000446851 USH1GQ495M9 461 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 GIMAP6Q6P9H5 292 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 PNMA1Q8ND90 353 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
LIN54-203ENST00000446851 GOPCQ9HD26 462 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 NOGQ13253 232 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 C16orf86Q6ZW13 317 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
LIN54-203ENST00000446851 FBXO28Q9NVF7 368 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 GNL2Q13823 731 aaKnown RBP12.03□□□□□ -0.48
LIN54-203ENST00000446851 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
LIN54-203ENST00000446851 F5H6K3 240 aa12.02□□□□□ -0.48
LIN54-203ENST00000446851 KLRC3Q07444 240 aa12.02□□□□□ -0.48
LIN54-203ENST00000446851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.02□□□□□ -0.48
LIN54-203ENST00000446851 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.48
LIN54-203ENST00000446851 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
LIN54-203ENST00000446851 JAG1P78504 1218 aa12.02□□□□□ -0.49
LIN54-203ENST00000446851 FOXD4L6Q3SYB3 417 aaPredicted RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 CPLX2Q6PUV4 134 aaKnown RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 FOXD4L3Q6VB84 417 aaPredicted RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 NECAB1Q8N987 351 aa12.02□□□□□ -0.49
LIN54-203ENST00000446851 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 WDR33Q9C0J8 1336 aaKnown RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 SLKQ9H2G2 1235 aaPredicted RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 RPAP3Q9H6T3 665 aaPredicted RBP12.02□□□□□ -0.49
LIN54-203ENST00000446851 CHMP4BP1P59074 171 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 CYB5R4Q7L1T6 521 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
LIN54-203ENST00000446851 NCAPG2Q86XI2 1143 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 ANKRD13CQ8N6S4 541 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
LIN54-203ENST00000446851 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 CETPP11597 493 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 WNK4Q96J92 1243 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 BACH2Q9BYV9 841 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 ATP2B1P20020 1258 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 GTF2A2P52657 109 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 ZBTB43O43298 467 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
LIN54-203ENST00000446851 SBK1Q52WX2 424 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
LIN54-203ENST00000446851 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
LIN54-203ENST00000446851 PDHXO00330 501 aa12□□□□□ -0.49
LIN54-203ENST00000446851 IVNS1ABPQ9Y6Y0 642 aa12□□□□□ -0.49
LIN54-203ENST00000446851 ALAS1P13196 640 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms