RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SYNRGQ9UMZ2 1314 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 GYPCP04921 128 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 FAM193AP78312 1265 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
ERCC3-203ENST00000445889 GPS2Q13227 327 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
ERCC3-203ENST00000445889 ZSCAN26Q16670 478 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 TXLNBQ8N3L3 684 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-203ENST00000445889 DACH1Q9UI36 760 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 ENC1O14682 589 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 STARD3NLO95772 234 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 SART3Q15020 963 aaKnown RBP16.15■□□□□ 0.18
ERCC3-203ENST00000445889 PUM3Q15397 648 aaKnown RBP16.15■□□□□ 0.18
ERCC3-203ENST00000445889 NCAPH2Q6IBW4 605 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 GPIHBP1Q8IV16 184 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 WASF1Q92558 559 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 ADD3Q9UEY8 706 aaKnown RBP16.15■□□□□ 0.18
ERCC3-203ENST00000445889 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 CAMTA1Q9Y6Y1 1673 aa16.15■□□□□ 0.18
ERCC3-203ENST00000445889 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.18
ERCC3-203ENST00000445889 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 N4BP3O15049 544 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 LPIN2Q92539 896 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 PLIN2Q99541 437 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 PLA2G12BQ9BX93 195 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 KRT23Q9C075 422 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 TNKSO95271 1327 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 MYO5AQ9Y4I1 1855 aaKnown RBP16.14■□□□□ 0.17
ERCC3-203ENST00000445889 ANKRD65E5RJM6 399 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 TULP2O00295 520 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 TRIM66O15016 1216 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 ATP8B1O43520 1251 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 NMT2O60551 498 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 SPATA1Q5VX52 437 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 SRGAP1Q7Z6B7 1085 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 NUP88Q99567 741 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-203ENST00000445889 CHP1Q99653 195 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
ERCC3-203ENST00000445889 GLI3P10071 1580 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 PPP1R3GB7ZBB8 358 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 ARID4AP29374 1257 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-203ENST00000445889 ERVK-24P63145 666 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 RRAGBQ5VZM2 374 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 NOA1Q8NC60 698 aaKnown RBP16.13■□□□□ 0.17
ERCC3-203ENST00000445889 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 TJP1Q07157 1748 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
ERCC3-203ENST00000445889 CYP7A1P22680 504 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 HDAC6Q9UBN7 1215 aa16.13■□□□□ 0.17
ERCC3-203ENST00000445889 MYO1BO43795 1136 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 MFAP3LO75121 409 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 ZMYND10O75800 440 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 MCM7P33993 719 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 VSNL1P62760 191 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 PTGDRQ13258 359 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 CUL4BQ13620 913 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 PKN1Q16512 942 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 JAKMIP3Q5VZ66 844 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 PLEKHA4Q9H4M7 779 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 CDC23Q9UJX2 597 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 SRGAP2O75044 1071 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
ERCC3-203ENST00000445889 PPARAQ07869 468 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 FOXR1Q6PIV2 292 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 C10orf67Q8IYJ2 551 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 NACAP1Q9BZK3 213 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 CNNM2Q9H8M5 875 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 CCDC151A5D8V7 595 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 PDE8AO60658 829 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 KRT31Q15323 416 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 BEND6Q5SZJ8 279 aaPredicted RBP16.12■□□□□ 0.17
ERCC3-203ENST00000445889 SPATA20Q8TB22 786 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 FEZ2Q9UHY8 353 aaPredicted RBP16.12■□□□□ 0.17
ERCC3-203ENST00000445889 GDAQ9Y2T3 454 aa16.12■□□□□ 0.17
ERCC3-203ENST00000445889 STK36Q9NRP7 1315 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 CTAGE9A4FU28 777 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-203ENST00000445889 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
ERCC3-203ENST00000445889 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 PANX2Q96RD6 677 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 FAN1Q9Y2M0 1017 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-203ENST00000445889 TRIM49BA6NDI0 452 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 SLC5A1P13866 664 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 FGFR2P21802 821 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 ALX1Q15699 326 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 ENAHQ8N8S7 591 aaPredicted RBP16.11■□□□□ 0.17
ERCC3-203ENST00000445889 MTRQ99707 1265 aa16.11■□□□□ 0.17
ERCC3-203ENST00000445889 MST1RQ04912 1400 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 FILIP1LQ4L180 1135 aa16.1■□□□□ 0.17
ERCC3-203ENST00000445889 STAG1Q8WVM7 1258 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms