RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PKN1Q16512 942 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 DOK7Q18PE1 504 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 RILPL1Q5EBL4 403 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 CC2D2BQ6DHV5 1058 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 CERS5Q8N5B7 392 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 FBXW7Q969H0 707 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 IL17RBQ9NRM6 502 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 TTF2Q9UNY4 1162 aaKnown RBP21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 ZNF646O15015 1829 aaPredicted RBP21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 MYH8P13535 1937 aa21.77■■□□□ 1.08
SEMA3D-202ENST00000444867 BTBD18B2RXH4 712 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 CAVIN2O95810 425 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 CDK8P49336 464 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 PTPAQ15257 358 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 SLC4A8Q2Y0W8 1093 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 SASS6Q6UVJ0 657 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 FMR1NBQ8N0W7 255 aaPredicted RBP21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 KCNJ14Q9UNX9 436 aa21.77■■□□□ 1.07
SEMA3D-202ENST00000444867 SNED1Q8TER0 1413 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 CMA1P23946 247 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 GNAQP50148 359 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 HS1BP3Q53T59 392 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 PNMA1Q8ND90 353 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 PHF20Q9BVI0 1012 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 MRIQ9BWK5 157 aa21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 V9GY48 417 aaPredicted RBP21.76■■□□□ 1.07
SEMA3D-202ENST00000444867 AXDND1Q5T1B0 1012 aaPredicted RBP21.75■■□□□ 1.07
SEMA3D-202ENST00000444867 CKAP2LQ8IYA6 745 aa21.75■■□□□ 1.07
SEMA3D-202ENST00000444867 NEDD1Q8NHV4 660 aa21.75■■□□□ 1.07
SEMA3D-202ENST00000444867 FAM200AQ8TCP9 573 aa21.75■■□□□ 1.07
SEMA3D-202ENST00000444867 BRMS1Q9HCU9 246 aa21.75■■□□□ 1.07
SEMA3D-202ENST00000444867 MRVI1Q9Y6F6 885 aa21.75■■□□□ 1.07
SEMA3D-202ENST00000444867 GRM4Q14833 912 aa21.74■■□□□ 1.07
SEMA3D-202ENST00000444867 STRIP1Q5VSL9 837 aa21.74■■□□□ 1.07
SEMA3D-202ENST00000444867 SRBD1Q8N5C6 995 aaKnown RBP21.74■■□□□ 1.07
SEMA3D-202ENST00000444867 TEKT1Q969V4 418 aa21.74■■□□□ 1.07
SEMA3D-202ENST00000444867 MORC2Q9Y6X9 1032 aaPredicted RBP21.74■■□□□ 1.07
SEMA3D-202ENST00000444867 CUTAO60888 179 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 KRT2P35908 639 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 GRIPAP1Q4V328 841 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 SLC44A5Q8NCS7 719 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 SUPT20HQ8NEM7 779 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 ADAMTSL1Q8N6G6 1762 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 PSDA5PKW4 1024 aaPredicted RBP21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 HDLBPQ00341 1268 aaKnown RBP21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 C7orf43Q8WVR3 580 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 LZTS2Q9BRK4 669 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 VPS54Q9P1Q0 977 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 TAOK2Q9UL54 1235 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 CEP131Q9UPN4 1083 aa21.73■■□□□ 1.07
SEMA3D-202ENST00000444867 PLIN4Q96Q06 1357 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 FAM237AA0A1B0GTK4 181 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 A0A1B0GVL5 298 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 F8W031 263 aaPredicted RBP21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 SCG2P13521 617 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 CHRNA5P30532 468 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 NDUFA8P51970 172 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 R3HDM1Q15032 1099 aaKnown RBP21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 PFKFB3Q16875 520 aaPredicted RBP21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
SEMA3D-202ENST00000444867 MYO3BQ8WXR4 1341 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 WDHD1O75717 1129 aaPredicted RBP21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 NOVP48745 357 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 FAM177A1Q8N128 213 aaPredicted RBP21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 TIGD1Q96MW7 591 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 TMEM47Q9BQJ4 181 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 DBNDD1Q9H9R9 158 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 USP40Q9NVE5 1235 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 SWAP70Q9UH65 585 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 SCN9AQ15858 1988 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 PSME4Q14997 1843 aa21.71■■□□□ 1.07
SEMA3D-202ENST00000444867 ECE2O60344 883 aa21.7■■□□□ 1.06
SEMA3D-202ENST00000444867 TOB1P50616 345 aaPredicted RBP21.7■■□□□ 1.06
SEMA3D-202ENST00000444867 SH3GLB2Q9NR46 395 aa21.7■■□□□ 1.06
SEMA3D-202ENST00000444867 MARCKSP29966 332 aaPredicted RBP21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 GABPAQ06546 454 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 NR5A1Q13285 461 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 STX1AQ16623 288 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 ANO6Q4KMQ2 910 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 SHISA4Q96DD7 197 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 ZDHHC15Q96MV8 337 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 BMP15O95972 392 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 TOP1P11387 765 aaKnown RBP21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 PFKFB1P16118 471 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 CRKP46108 304 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 DACT2Q5SW24 774 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 RESP18Q5W5W9 173 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 KRI1Q8N9T8 703 aaKnown RBP21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 OXER1Q8TDS5 423 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 SLC16A10Q8TF71 515 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 SDF4Q9BRK5 362 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 MXD3Q9BW11 206 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 MAD2L2Q9UI95 211 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 NOL7Q9UMY1 257 aaKnown RBP21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 STX8Q9UNK0 236 aa21.69■■□□□ 1.06
SEMA3D-202ENST00000444867 HPSEQ9Y251 543 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms