RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 VPS53Q5VIR6 699 aa23.51■■□□□ 1.35
NELFE-206ENST00000444811 OTOP1Q7RTM1 612 aa23.51■■□□□ 1.35
NELFE-206ENST00000444811 SDSP20132 328 aa23.5■■□□□ 1.35
NELFE-206ENST00000444811 MCMDC2Q4G0Z9 681 aa23.5■■□□□ 1.35
NELFE-206ENST00000444811 TMEM179Q6ZVK1 233 aa23.5■■□□□ 1.35
NELFE-206ENST00000444811 ZNF589Q86UQ0 364 aaPredicted RBP23.5■■□□□ 1.35
NELFE-206ENST00000444811 CCDC17Q96LX7 622 aa23.5■■□□□ 1.35
NELFE-206ENST00000444811 TMOD4Q9NZQ9 345 aa23.5■■□□□ 1.35
NELFE-206ENST00000444811 TRIM17Q9Y577 477 aa23.5■■□□□ 1.35
NELFE-206ENST00000444811 SOX10P56693 466 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 TTC22Q5TAA0 569 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 USP17L2Q6R6M4 530 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 STK11IPQ8N1F8 1099 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 C12orf42Q96LP6 360 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 NACAP1Q9BZK3 213 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 ARHGAP39Q9C0H5 1083 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 KIAA1683Q9H0B3 1180 aa23.49■■□□□ 1.35
NELFE-206ENST00000444811 HTTP42858 3142 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 A0A1W2PRG0 241 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 CTGFP29279 349 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 LACTBP83111 547 aaPredicted RBP23.48■■□□□ 1.35
NELFE-206ENST00000444811 ZYXQ15942 572 aaKnown RBP23.48■■□□□ 1.35
NELFE-206ENST00000444811 PKN2Q16513 984 aaKnown RBP23.48■■□□□ 1.35
NELFE-206ENST00000444811 CLEC10AQ8IUN9 316 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 SIAH1Q8IUQ4 282 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 FEZ1Q99689 392 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 NAPBQ9H115 298 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 ASCC2Q9H1I8 757 aaPredicted RBP23.48■■□□□ 1.35
NELFE-206ENST00000444811 PNMA3Q9UL41 463 aa23.48■■□□□ 1.35
NELFE-206ENST00000444811 GREB1LQ9C091 1923 aaPredicted RBP23.48■■□□□ 1.35
NELFE-206ENST00000444811 RASA1P20936 1047 aa23.47■■□□□ 1.35
NELFE-206ENST00000444811 HOXA7P31268 230 aaPredicted RBP23.47■■□□□ 1.35
NELFE-206ENST00000444811 PABPC4Q13310 644 aaKnown RBP eCLIP23.47■■□□□ 1.352e-10■■■■□ 19.3
NELFE-206ENST00000444811 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.47■■□□□ 1.35
NELFE-206ENST00000444811 EFCC1Q9HA90 598 aa23.47■■□□□ 1.35
NELFE-206ENST00000444811 FBXO46Q6PJ61 603 aaPredicted RBP23.46■■□□□ 1.35
NELFE-206ENST00000444811 CCDC171Q6TFL3 1326 aa23.46■■□□□ 1.35
NELFE-206ENST00000444811 OSBPP22059 807 aa23.45■■□□□ 1.34
NELFE-206ENST00000444811 USP14P54578 494 aa23.45■■□□□ 1.34
NELFE-206ENST00000444811 PPARAQ07869 468 aa23.45■■□□□ 1.34
NELFE-206ENST00000444811 ALX1Q15699 326 aa23.45■■□□□ 1.34
NELFE-206ENST00000444811 SMCR8Q8TEV9 937 aaPredicted RBP23.45■■□□□ 1.34
NELFE-206ENST00000444811 CENPFP49454 3210 aa23.45■■□□□ 1.34
NELFE-206ENST00000444811 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
NELFE-206ENST00000444811 ICA1Q05084 483 aa23.44■■□□□ 1.34
NELFE-206ENST00000444811 MKNK2Q9HBH9 465 aa23.44■■□□□ 1.34
NELFE-206ENST00000444811 HPS5Q9UPZ3 1129 aa23.44■■□□□ 1.34
NELFE-206ENST00000444811 PTPN22Q9Y2R2 807 aa23.44■■□□□ 1.34
NELFE-206ENST00000444811 PRDM1O75626 825 aa23.43■■□□□ 1.34
NELFE-206ENST00000444811 ECM2O94769 699 aaPredicted RBP23.43■■□□□ 1.34
NELFE-206ENST00000444811 VCAM1P19320 739 aa23.43■■□□□ 1.34
NELFE-206ENST00000444811 KIAA1755Q5JYT7 1200 aa23.43■■□□□ 1.34
NELFE-206ENST00000444811 CWC27Q6UX04 472 aaKnown RBP23.43■■□□□ 1.34
NELFE-206ENST00000444811 CENPQQ7L2Z9 268 aaPredicted RBP23.43■■□□□ 1.34
NELFE-206ENST00000444811 ANKRD13CQ8N6S4 541 aa23.43■■□□□ 1.34
NELFE-206ENST00000444811 P2RX7Q99572 595 aaKnown RBP23.43■■□□□ 1.34
NELFE-206ENST00000444811 DIAPH3Q9NSV4 1193 aa23.43■■□□□ 1.34
NELFE-206ENST00000444811 TACC3Q9Y6A5 838 aa23.43■■□□□ 1.34
NELFE-206ENST00000444811 MKI67P46013 3256 aaKnown RBP23.43■■□□□ 1.34
NELFE-206ENST00000444811 FGAP02671 866 aa23.42■■□□□ 1.34
NELFE-206ENST00000444811 IRX3P78415 501 aaPredicted RBP23.42■■□□□ 1.34
NELFE-206ENST00000444811 KIF22Q14807 665 aa23.42■■□□□ 1.34
NELFE-206ENST00000444811 TRIM47Q96LD4 638 aa23.42■■□□□ 1.34
NELFE-206ENST00000444811 ANAPC4Q9UJX5 808 aa23.42■■□□□ 1.34
NELFE-206ENST00000444811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.42■■□□□ 1.34
NELFE-206ENST00000444811 TMX2Q9Y320 296 aa23.42■■□□□ 1.34
NELFE-206ENST00000444811 MGAMO43451 1857 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 ZMYM6O95789 1325 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 IGKV6D-41A0A0C4DH26 115 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 HIP1O00291 1037 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 EEF2P13639 858 aaKnown RBP23.41■■□□□ 1.34
NELFE-206ENST00000444811 PSMC4P43686 418 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 GCLCP48506 637 aaPredicted RBP23.41■■□□□ 1.34
NELFE-206ENST00000444811 CTDSPL2Q05D32 466 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 FAM110CQ1W6H9 321 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 POTEEQ6S8J3 1075 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 IL25Q9H293 177 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 KANSL2Q9H9L4 492 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 ARHGEF10LQ9HCE6 1279 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 BRCA2P51587 3418 aa23.41■■□□□ 1.34
NELFE-206ENST00000444811 USP17L15C9J2P7 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L13C9JLJ4 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L11C9JVI0 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L18D6R9N7 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L22D6RA61 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L17D6RBQ6 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L19D6RCP7 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L20D6RJB6 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 HERVK_113P62684 666 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 USP17L24Q0WX57 530 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 ARHGEF6Q15052 776 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 CATSPERGQ6ZRH7 1159 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 SKAP1Q86WV1 359 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 ZNF287Q9HBT7 754 aa23.4■■□□□ 1.34
NELFE-206ENST00000444811 PEX10O60683 326 aa23.39■■□□□ 1.33
NELFE-206ENST00000444811 PDE4BQ07343 736 aa23.39■■□□□ 1.33
NELFE-206ENST00000444811 ZNF444Q8N0Y2 327 aaPredicted RBP23.39■■□□□ 1.33
NELFE-206ENST00000444811 RPAP3Q9H6T3 665 aaPredicted RBP23.39■■□□□ 1.33
NELFE-206ENST00000444811 VCPKMTQ9H867 229 aa23.39■■□□□ 1.33
NELFE-206ENST00000444811 INCENPQ9NQS7 918 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms