RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 FOCADQ5VW36 1801 aa16.18■□□□□ 0.18
GARNL3-208ENST00000444677 PRDM1O75626 825 aa16.18■□□□□ 0.18
GARNL3-208ENST00000444677 GSPT1P15170 499 aaKnown RBP16.18■□□□□ 0.18
GARNL3-208ENST00000444677 LACTBP83111 547 aaPredicted RBP16.18■□□□□ 0.18
GARNL3-208ENST00000444677 USP17L2Q6R6M4 530 aa16.18■□□□□ 0.18
GARNL3-208ENST00000444677 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
GARNL3-208ENST00000444677 INCENPQ9NQS7 918 aa16.18■□□□□ 0.18
GARNL3-208ENST00000444677 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
GARNL3-208ENST00000444677 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
GARNL3-208ENST00000444677 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
GARNL3-208ENST00000444677 PTPRFP10586 1907 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 RASA1P20936 1047 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 TMEM179Q6ZVK1 233 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 FEZ1Q99689 392 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 NAPBQ9H115 298 aa16.17■□□□□ 0.18
GARNL3-208ENST00000444677 OSBPP22059 807 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 PSMC4P43686 418 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 SOX10P56693 466 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 CTDSPL2Q05D32 466 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 PKN2Q16513 984 aaKnown RBP16.16■□□□□ 0.18
GARNL3-208ENST00000444677 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
GARNL3-208ENST00000444677 POTEEQ6S8J3 1075 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 SMCR8Q8TEV9 937 aaPredicted RBP16.16■□□□□ 0.18
GARNL3-208ENST00000444677 TRIM47Q96LD4 638 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 C12orf42Q96LP6 360 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 CCDC17Q96LX7 622 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 MKNK2Q9HBH9 465 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 PHIPQ8WWQ0 1821 aa16.16■□□□□ 0.18
GARNL3-208ENST00000444677 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
GARNL3-208ENST00000444677 ICA1Q05084 483 aa16.15■□□□□ 0.18
GARNL3-208ENST00000444677 PPARAQ07869 468 aa16.15■□□□□ 0.18
GARNL3-208ENST00000444677 PABPC4Q13310 644 aaKnown RBP eCLIP16.15■□□□□ 0.18
GARNL3-208ENST00000444677 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
GARNL3-208ENST00000444677 ROBO3Q96MS0 1386 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 MYH1P12882 1939 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
GARNL3-208ENST00000444677 HSPD1P10809 573 aaKnown RBP16.14■□□□□ 0.17
GARNL3-208ENST00000444677 EEF2P13639 858 aaKnown RBP16.14■□□□□ 0.17
GARNL3-208ENST00000444677 VCAM1P19320 739 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 USP14P54578 494 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 IRX3P78415 501 aaPredicted RBP16.14■□□□□ 0.17
GARNL3-208ENST00000444677 ATP2B2Q01814 1243 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 KIF22Q14807 665 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
GARNL3-208ENST00000444677 IL25Q9H293 177 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 PTCH2Q9Y6C5 1203 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
GARNL3-208ENST00000444677 FGAP02671 866 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 MLLT1Q03111 559 aaPredicted RBP16.13■□□□□ 0.17
GARNL3-208ENST00000444677 ALX1Q15699 326 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
GARNL3-208ENST00000444677 RBPJLQ9UBG7 517 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L15C9J2P7 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L13C9JLJ4 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L11C9JVI0 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L18D6R9N7 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L22D6RA61 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L17D6RBQ6 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L19D6RCP7 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L20D6RJB6 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 HERVK_113P62684 666 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 USP17L24Q0WX57 530 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 Q3C1V9 767 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
GARNL3-208ENST00000444677 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 DIAPH3Q9NSV4 1193 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 GABRQQ9UN88 632 aa16.12■□□□□ 0.17
GARNL3-208ENST00000444677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
GARNL3-208ENST00000444677 RBBP6Q7Z6E9 1792 aaKnown RBP16.12■□□□□ 0.17
GARNL3-208ENST00000444677 IGKV6D-41A0A0C4DH26 115 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 CNMDO75829 334 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 GCLCP48506 637 aaPredicted RBP16.11■□□□□ 0.17
GARNL3-208ENST00000444677 FAM110CQ1W6H9 321 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 NKX2-3Q8TAU0 364 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 PAGR1Q9BTK6 254 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 VCPKMTQ9H867 229 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 KANSL2Q9H9L4 492 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 ARHGEF10LQ9HCE6 1279 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 SRRDQ9UH36 339 aa16.11■□□□□ 0.17
GARNL3-208ENST00000444677 MGAMO43451 1857 aa16.1■□□□□ 0.17
GARNL3-208ENST00000444677 RGS19P49795 217 aa16.1■□□□□ 0.17
GARNL3-208ENST00000444677 FCGRTP55899 365 aa16.1■□□□□ 0.17
GARNL3-208ENST00000444677 HAND2P61296 217 aa16.1■□□□□ 0.17
GARNL3-208ENST00000444677 TFAP4Q01664 338 aa16.1■□□□□ 0.17
GARNL3-208ENST00000444677 PRKCZQ05513 592 aa16.1■□□□□ 0.17
GARNL3-208ENST00000444677 ARHGEF6Q15052 776 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms