RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 SLC44A5Q8NCS7 719 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 RAET1EQ8TD07 263 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 DYNLL2Q96FJ2 89 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 TNPO2O14787 897 aaKnown RBP22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 GPAA1O43292 621 aa22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 CDK8P49336 464 aa22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 PDE1AP54750 535 aa22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 HERVK_113P62684 666 aa22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 EXOC6Q8TAG9 804 aa22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 FSD1Q9BTV5 496 aa22.58■■□□□ 1.21
ATPAF2-201ENST00000444058 USP17L15C9J2P7 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L13C9JLJ4 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L11C9JVI0 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L18D6R9N7 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L22D6RA61 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L17D6RBQ6 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L19D6RCP7 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L20D6RJB6 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 MPHOSPH10O00566 681 aaKnown RBP22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 PRKCZQ05513 592 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 USP17L24Q0WX57 530 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 IRF5Q13568 498 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 ACER1Q8TDN7 264 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 COA7Q96BR5 231 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 TMEM106CQ9BVX2 250 aa22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
ATPAF2-201ENST00000444058 CYP2D7A0A087X1C5 515 aa22.56■■□□□ 1.2
ATPAF2-201ENST00000444058 ECM2O94769 699 aaPredicted RBP22.56■■□□□ 1.2
ATPAF2-201ENST00000444058 GRK4P32298 578 aa22.56■■□□□ 1.2
ATPAF2-201ENST00000444058 ZMYM1Q5SVZ6 1142 aa22.56■■□□□ 1.2
ATPAF2-201ENST00000444058 EVI5LQ96CN4 794 aa22.56■■□□□ 1.2
ATPAF2-201ENST00000444058 BAZ2AQ9UIF9 1905 aaKnown RBP22.56■■□□□ 1.2
ATPAF2-201ENST00000444058 PATL2C9JE40 543 aaKnown RBP22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 M0R2C6 588 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 VCAM1P19320 739 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 FLT3LGP49771 235 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 SLAIN1Q8ND83 568 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 GPRC5AQ8NFJ5 357 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 PXYLP1Q8TE99 480 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 SH3TC2Q8TF17 1288 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 MGAMO43451 1857 aa22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 RBBP6Q7Z6E9 1792 aaKnown RBP22.55■■□□□ 1.2
ATPAF2-201ENST00000444058 ROBO3Q96MS0 1386 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 POTEFA5A3E0 1075 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 AKR1B1P15121 316 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 ZYXQ15942 572 aaKnown RBP22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 CATSPERGQ6ZRH7 1159 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 SH2D4AQ9H788 454 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 RBPJLQ9UBG7 517 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 GABRQQ9UN88 632 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 CENPFP49454 3210 aa22.54■■□□□ 1.2
ATPAF2-201ENST00000444058 KIAA0100Q14667 2235 aaKnown RBP22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 A0A1W2PRG0 241 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 SMIM22K7EJ46 135 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 IGHDP01880 384 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 LBX2Q6XYB7 198 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 LPAR1Q92633 364 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 LNPKQ9C0E8 428 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 KANSL2Q9H9L4 492 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 ARHGEF10LQ9HCE6 1279 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 TXNRD2Q9NNW7 524 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 TMX2Q9Y320 296 aa22.53■■□□□ 1.2
ATPAF2-201ENST00000444058 NUCB1Q02818 461 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 ICA1Q05084 483 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 SIAH1Q8IUQ4 282 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 IFNL3Q8IZI9 196 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 ZNF287Q9HBT7 754 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 EPB41L4AQ9HCS5 686 aaPredicted RBP22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 RABGAP1Q9Y3P9 1069 aa22.52■■□□□ 1.2
ATPAF2-201ENST00000444058 ADCY3O60266 1144 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 APPP05067 770 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 TDO2P48775 406 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 ERVK-9P63128 1117 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 ERVK-24P63145 666 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 UBXN2AP68543 259 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 SEC62Q99442 399 aaKnown RBP22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 OSBPL3Q9H4L5 887 aa22.51■■□□□ 1.19
ATPAF2-201ENST00000444058 MINDY4BA8MYZ0 360 aa22.5■■□□□ 1.19
ATPAF2-201ENST00000444058 MAPK4P31152 587 aa22.5■■□□□ 1.19
ATPAF2-201ENST00000444058 POTEEQ6S8J3 1075 aa22.5■■□□□ 1.19
ATPAF2-201ENST00000444058 RPAP3Q9H6T3 665 aaPredicted RBP22.5■■□□□ 1.19
ATPAF2-201ENST00000444058 GJD2Q9UKL4 321 aa22.5■■□□□ 1.19
ATPAF2-201ENST00000444058 MYH8P13535 1937 aa22.49■■□□□ 1.19
ATPAF2-201ENST00000444058 B4GALNT3Q6L9W6 998 aa22.49■■□□□ 1.19
ATPAF2-201ENST00000444058 MKNK2Q9HBH9 465 aa22.49■■□□□ 1.19
ATPAF2-201ENST00000444058 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
ATPAF2-201ENST00000444058 HOXC10Q9NYD6 342 aa22.49■■□□□ 1.19
ATPAF2-201ENST00000444058 RASA1P20936 1047 aa22.48■■□□□ 1.19
ATPAF2-201ENST00000444058 CCNA1P78396 465 aa22.48■■□□□ 1.19
ATPAF2-201ENST00000444058 COG2Q14746 738 aa22.48■■□□□ 1.19
ATPAF2-201ENST00000444058 Q3C1V9 767 aa22.48■■□□□ 1.19
ATPAF2-201ENST00000444058 VCPKMTQ9H867 229 aa22.48■■□□□ 1.19
ATPAF2-201ENST00000444058 BIN2Q9UBW5 565 aaPredicted RBP22.48■■□□□ 1.19
ATPAF2-201ENST00000444058 SPDYE16A6NNV3 312 aaPredicted RBP22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 EEF2P13639 858 aaKnown RBP22.47■■□□□ 1.19
ATPAF2-201ENST00000444058 EN2P19622 333 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms