RNA–Protein interactions for RNA: ENST00000443740.5

CARF-215, Transcript of calcium responsive transcription factor, human

TSL 3

Gene CARF, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARF-215	ENST00000443740	OSBPL1A	Q9BXW6	950 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	KRTAP4-2	Q9BYR5	136 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	BCO2	Q9BYV7	579 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	ATG3	Q9NT62	314 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	FAM105A	Q9NUU6	356 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	LEMD3	Q9Y2U8	911 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	ABCC5	O15440	1437 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	DCC	P43146	1447 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	SLIT2	O94813	1529 aa		4.62	□□□□□ -1.67
CARF-215	ENST00000443740	GRIN3B	O60391	1043 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	ZBTB7A	O95365	584 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	NFIC	P08651	508 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	RAB6A	P20340	208 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	MAPK1	P28482	360 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	FCGRT	P55899	365 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	HTRA3	P83110	453 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	PLCB3	Q01970	1234 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	MAP7	Q14244	749 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	DTHD1	Q6ZMT9	781 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	METTL22	Q9BUU2	404 aa	Predicted RBP	4.61	□□□□□ -1.67
CARF-215	ENST00000443740	SEMA6C	Q9H3T2	930 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	ACSS3	Q9H6R3	686 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	NLRP2	Q9NX02	1062 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	PPP4R2	Q9NY27	417 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	PPP1R9A	Q9ULJ8	1098 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	AP4E1	Q9UPM8	1137 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	CCDC9	Q9Y3X0	531 aa	Known RBP	4.61	□□□□□ -1.67
CARF-215	ENST00000443740	CFAP65	Q6ZU64	1925 aa	Known RBP	4.61	□□□□□ -1.67
CARF-215	ENST00000443740	WASHC2C	Q9Y4E1	1318 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	ADCY9	O60503	1353 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	MYOM2	P54296	1465 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	ERVK-7	P63135	1459 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	NEXMIF	Q5QGS0	1516 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	EFCAB6	Q5THR3	1501 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	SYCP2	Q9BX26	1530 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	LAMC1	P11047	1609 aa		4.61	□□□□□ -1.67
CARF-215	ENST00000443740	PNMA6F	A0A0J9YX94	578 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	TOMM70	O94826	608 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	WNT11	O96014	354 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	XRCC5	P13010	732 aa	Known RBP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	FOSL1	P15407	271 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	LIG1	P18858	919 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	ASPA	P45381	313 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	ENOX2	Q16206	610 aa	Known RBP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	MSMP	Q1L6U9	139 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	SEZ6L2	Q6UXD5	910 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	PDZD3	Q86UT5	571 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	DDX17	Q92841	729 aa	Known RBP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	WDR89	Q96FK6	387 aa	Predicted RBP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	CCDC86	Q9H6F5	360 aa	Known RBP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	PRDM10	Q9NQV6	1147 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	C1GALT1	Q9NS00	363 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	KRT82	Q9NSB4	513 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	TMEM39A	Q9NV64	488 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	TMEM2	Q9UHN6	1383 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	MST1R	Q04912	1400 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	RPRD2	Q5VT52	1461 aa	Known RBP	4.6	□□□□□ -1.67
CARF-215	ENST00000443740	NWD2	Q9ULI1	1742 aa		4.6	□□□□□ -1.67
CARF-215	ENST00000443740	CCDC85C	A6NKD9	419 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	FAM170B	A6NMN3	283 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	TMPRSS2	O15393	492 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	DYNC1LI2	O43237	492 aa	Predicted RBP	4.59	□□□□□ -1.67
CARF-215	ENST00000443740	TRIM37	O94972	964 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	GSTP1	P09211	210 aa	Known RBP	4.59	□□□□□ -1.67
CARF-215	ENST00000443740	JAG1	P78504	1218 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	PLCH1	Q4KWH8	1693 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	NXPE4	Q6UWF7	544 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.59	□□□□□ -1.67
CARF-215	ENST00000443740	CRIM1	Q9NZV1	1036 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	GPN3	Q9UHW5	284 aa	Predicted RBP	4.59	□□□□□ -1.67
CARF-215	ENST00000443740	PCDHGC5	Q9Y5F6	944 aa		4.59	□□□□□ -1.67
CARF-215	ENST00000443740	PIK3C2B	O00750	1634 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	USP32	Q8NFA0	1604 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	PTPN23	Q9H3S7	1636 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	ADGRB3	O60242	1522 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	CYP26A1	O43174	497 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	ZNF862	O60290	1169 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	SLFN14	P0C7P3	912 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	PPP2R3A	Q06190	1150 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	VPS72	Q15906	364 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	KIF4B	Q2VIQ3	1234 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	C3orf58	Q8NDZ4	430 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	STK35	Q8TDR2	534 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	ASB16	Q96NS5	453 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	FANCD2OS	Q96PS1	177 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.58	□□□□□ -1.68
CARF-215	ENST00000443740	ADGRE2	Q9UHX3	823 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	IVNS1ABP	Q9Y6Y0	642 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	CUL9	Q8IWT3	2517 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.58	□□□□□ -1.68
CARF-215	ENST00000443740	RGPD4	Q7Z3J3	1758 aa		4.58	□□□□□ -1.68
CARF-215	ENST00000443740	CLIP1	P30622	1438 aa		4.57	□□□□□ -1.68
CARF-215	ENST00000443740	DHX57	Q6P158	1386 aa	Known RBP	4.57	□□□□□ -1.68
CARF-215	ENST00000443740	PRNP	P04156	253 aa		4.57	□□□□□ -1.68
CARF-215	ENST00000443740	FMR1	Q06787	632 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
CARF-215	ENST00000443740	KCNA1	Q09470	495 aa		4.57	□□□□□ -1.68
CARF-215	ENST00000443740	ZNF765	Q7L2R6	523 aa		4.57	□□□□□ -1.68
CARF-215	ENST00000443740	FBF1	Q8TES7	1133 aa		4.57	□□□□□ -1.68
CARF-215	ENST00000443740	MTFR1L	Q9H019	292 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms