RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
HLA-DQB1-206ENST00000443574 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 TLR2O60603 784 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 SDSP20132 328 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PDE4AP27815 886 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CDK8P49336 464 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 BACE1P56817 501 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PDE4BQ07343 736 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 KIF22Q14807 665 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CTU1Q7Z7A3 348 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 MKNK2Q9HBH9 465 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ARHGEF10LQ9HCE6 1279 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 EPB41L4AQ9HCS5 686 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 RAD50Q92878 1312 aa12.33□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PARP14Q460N5 1801 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 OSBPP22059 807 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 SP3Q02447 781 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ICA1Q05084 483 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 DGKZQ13574 1117 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 DYNLL2Q96FJ2 89 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ZSWIM8A7E2V4 1837 aa12.32□□□□□ -0.44
HLA-DQB1-206ENST00000443574 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PPARAQ07869 468 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 MOGSQ13724 837 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 SEPT2Q15019 361 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 A0A0G2JMZ2 1700 aa12.31□□□□□ -0.44
HLA-DQB1-206ENST00000443574 AKR1B1P15121 316 aa12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 GSPT1P15170 499 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ZNF444Q8N0Y2 327 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 C12orf42Q96LP6 360 aa12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 KANSL2Q9H9L4 492 aa12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
HLA-DQB1-206ENST00000443574 GNRH1P01148 92 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CYP2C8P10632 490 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 JAG1P78504 1218 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 EVX2Q03828 476 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ALX1Q15699 326 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 SHROOM1Q2M3G4 852 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 LPAR1Q92633 364 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 R3HDMLQ9H3Y0 253 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ADGRA2Q96PE1 1338 aa12.29□□□□□ -0.44
HLA-DQB1-206ENST00000443574 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 TSPY3P0CV98 308 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 TSPY8P0CW00 308 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 HSPD1P10809 573 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 PCP11498 1178 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 RASA1P20936 1047 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 LACTBP83111 547 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ATP2B2Q01814 1243 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 FAM110CQ1W6H9 321 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 STK11IPQ8N1F8 1099 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CD99L2Q8TCZ2 262 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 MCOLN1Q9GZU1 580 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 RNF41Q9H4P4 317 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 CPA4Q9UI42 421 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 ANAPC4Q9UJX5 808 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
HLA-DQB1-206ENST00000443574 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 VCAM1P19320 739 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 NT5C2P49902 561 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 CASC1Q6TDU7 716 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 C17orf99Q6UX52 265 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-206ENST00000443574 TOMM22Q9NS69 142 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms