RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 EMILIN3Q9NT22 766 aa15.34■□□□□ 0.05
PDLIM2-212ENST00000443561 GINM1Q9NU53 330 aa15.34■□□□□ 0.05
PDLIM2-212ENST00000443561 TAF6LQ9Y6J9 622 aa15.34■□□□□ 0.05
PDLIM2-212ENST00000443561 RAD50Q92878 1312 aa15.34■□□□□ 0.05
PDLIM2-212ENST00000443561 HIP1O00291 1037 aa15.33■□□□□ 0.04
PDLIM2-212ENST00000443561 CTCFP49711 727 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-212ENST00000443561 COL13A1Q5TAT6 717 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-212ENST00000443561 ANKRD23Q86SG2 305 aa15.33■□□□□ 0.04
PDLIM2-212ENST00000443561 DSCC1Q9BVC3 393 aa15.33■□□□□ 0.04
PDLIM2-212ENST00000443561 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.04
PDLIM2-212ENST00000443561 COL11A1P12107 1806 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-212ENST00000443561 CA12O43570 354 aa15.32■□□□□ 0.04
PDLIM2-212ENST00000443561 BACE1P56817 501 aa15.32■□□□□ 0.04
PDLIM2-212ENST00000443561 HAND2P61296 217 aa15.32■□□□□ 0.04
PDLIM2-212ENST00000443561 RAB3GAP1Q15042 981 aa15.32■□□□□ 0.04
PDLIM2-212ENST00000443561 GADL1Q6ZQY3 521 aa15.32■□□□□ 0.04
PDLIM2-212ENST00000443561 PLXNB2O15031 1838 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 PDHXO00330 501 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 CYP2C8P10632 490 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 COL9A3Q14050 684 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 TMEM179Q6ZVK1 233 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 NACAP1Q9BZK3 213 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 AGTPBP1Q9UPW5 1226 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 NEDD4P46934 1319 aa15.31■□□□□ 0.04
PDLIM2-212ENST00000443561 HTTP42858 3142 aa15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 GPR25O00155 361 aa15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 CTGFP29279 349 aa15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 TAF1CQ15572 869 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 ZNF296Q8WUU4 475 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 ZCCHC17Q9NP64 241 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
PDLIM2-212ENST00000443561 USP17L10C9JJH3 530 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 ORC4O43929 436 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 NMT2O60551 498 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 PEX10O60683 326 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 AMOTL1Q8IY63 956 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 STAG1Q8WVM7 1258 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 AS3MTQ9HBK9 375 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 IL17RBQ9NRM6 502 aa15.29■□□□□ 0.04
PDLIM2-212ENST00000443561 ALDH1A1P00352 501 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 EEF2P13639 858 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 VCAM1P19320 739 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 NOVP48745 357 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 ICA1Q05084 483 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 RASGRP2Q7LDG7 609 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 NEDD1Q8NHV4 660 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 CEP95Q96GE4 821 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 CABP5Q9NP86 173 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
PDLIM2-212ENST00000443561 C19orf81C9J6K1 198 aa15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 TLR2O60603 784 aa15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 CYP21A2P08686 494 aa15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 BCRP11274 1271 aa15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 ASCC2Q9H1I8 757 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-212ENST00000443561 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 TFAP4Q01664 338 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 AKNAD1Q5T1N1 836 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 USP17L2Q6R6M4 530 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 ARHGAP39Q9C0H5 1083 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 MKNK2Q9HBH9 465 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 NYAP2Q9P242 653 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
PDLIM2-212ENST00000443561 CDC45O75419 566 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 PDE4BQ07343 736 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 RCSD1Q6JBY9 416 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 CD99L2Q8TCZ2 262 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 FEZ1Q99689 392 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 VCPKMTQ9H867 229 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 ZFYVE28Q9HCC9 887 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 TXNRD2Q9NNW7 524 aa15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-212ENST00000443561 CNMDO75829 334 aa15.24■□□□□ 0.03
PDLIM2-212ENST00000443561 OTUD7BQ6GQQ9 843 aa15.24■□□□□ 0.03
PDLIM2-212ENST00000443561 SPICE1Q8N0Z3 855 aa15.24■□□□□ 0.03
PDLIM2-212ENST00000443561 P2RX7Q99572 595 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-212ENST00000443561 SMCHD1A6NHR9 2005 aa15.24■□□□□ 0.03
PDLIM2-212ENST00000443561 FKTNO75072 461 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms