RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
CHFR-204ENST00000443047 COL16A1Q07092 1604 aaPredicted RBP17.17■□□□□ 0.34
CHFR-204ENST00000443047 SPTLC2O15270 562 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 STX10O60499 249 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 ZMYND10O75800 440 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CCDC175P0C221 793 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 USP5P45974 858 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 AIFM3Q96NN9 605 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 MED4Q9NPJ6 270 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 RAB21Q9UL25 225 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 AKAP11Q9UKA4 1901 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CTAGE15A4D2H0 777 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CTAGE8P0CG41 777 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 INPP5BP32019 993 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 USP8P40818 1118 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 OLFM4Q6UX06 510 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CYB5R4Q7L1T6 521 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CTAGE6Q86UF2 777 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CTAGE4Q8IX94 777 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 TC2NQ8N9U0 490 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 NOA1Q8NC60 698 aaKnown RBP17.16■□□□□ 0.34
CHFR-204ENST00000443047 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHFR-204ENST00000443047 INTS13Q9NVM9 706 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CAPN7Q9Y6W3 813 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CARMIL3Q8ND23 1372 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 B4E1Z4 1266 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 IKBKBO14920 756 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 PFKFB1P16118 471 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 CCDC24Q8N4L8 307 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 MAGEB6Q8N7X4 407 aa17.16■□□□□ 0.34
CHFR-204ENST00000443047 DOT1LQ8TEK3 1739 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 PRKAB2O43741 272 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 KIF1CO43896 1103 aaKnown RBP17.15■□□□□ 0.34
CHFR-204ENST00000443047 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 NCOA7Q8NI08 942 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 FAM107BQ9H098 131 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
CHFR-204ENST00000443047 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 SYNE3Q6ZMZ3 975 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 BCAS4Q8TDM0 211 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
CHFR-204ENST00000443047 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
CHFR-204ENST00000443047 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
CHFR-204ENST00000443047 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
CHFR-204ENST00000443047 COL14A1Q05707 1796 aaKnown RBP17.14■□□□□ 0.34
CHFR-204ENST00000443047 SYF2O95926 243 aaKnown RBP17.14■□□□□ 0.33
CHFR-204ENST00000443047 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 MSANTD4Q8NCY6 345 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 KAT14Q9H8E8 782 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 MYO1FO00160 1098 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 SATB1Q01826 763 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.33
CHFR-204ENST00000443047 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.14■□□□□ 0.33
CHFR-204ENST00000443047 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 SPATA5Q8NB90 893 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 LPIN2Q92539 896 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 AIDAQ96BJ3 306 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
CHFR-204ENST00000443047 CTAGE9A4FU28 777 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 SLC35F6Q8N357 371 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 MBD4O95243 580 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 FGFR2P21802 821 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 SYKP43405 635 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 FAM98CQ17RN3 349 aaKnown RBP17.13■□□□□ 0.33
CHFR-204ENST00000443047 SPECC1LQ69YQ0 1117 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 TRMT44Q8IYL2 757 aaKnown RBP17.13■□□□□ 0.33
CHFR-204ENST00000443047 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 CD248Q9HCU0 757 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 TACC3Q9Y6A5 838 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 NEDD4P46934 1319 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 MYH14Q7Z406 1995 aaKnown RBP17.13■□□□□ 0.33
CHFR-204ENST00000443047 A0A1W2PQ27 194 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 A0A1W2PQ64 194 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 A0A1W2PQD8 194 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 ABL1P00519 1130 aa17.13■□□□□ 0.33
CHFR-204ENST00000443047 MYH3P11055 1940 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 TCRBV5S4A2TA0A5A2 114 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 CPLX1O14810 134 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 MICU3Q86XE3 530 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 PHKBQ93100 1093 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
CHFR-204ENST00000443047 RDXP35241 583 aaKnown RBP17.12■□□□□ 0.33
CHFR-204ENST00000443047 GGCXP38435 758 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 LRCH2Q5VUJ6 765 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
CHFR-204ENST00000443047 ZKSCAN3Q9BRR0 538 aa17.12■□□□□ 0.33
CHFR-204ENST00000443047 COL4A1P02462 1669 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms