RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SCINQ9Y6U3 715 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 TTC36A6NLP5 189 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
LIN54-202ENST00000442461 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
LIN54-202ENST00000442461 PAX7P23759 505 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 RRP36Q96EU6 259 aaKnown RBP11.4□□□□□ -0.58
LIN54-202ENST00000442461 FTOQ9C0B1 505 aaKnown RBP eCLIP11.4□□□□□ -0.58
LIN54-202ENST00000442461 LCMT1Q9UIC8 334 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 hCG_2014768A0A024R1R8 64 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 PFKFB2O60825 505 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 ZFXP17010 805 aaPredicted RBP11.4□□□□□ -0.58
LIN54-202ENST00000442461 KRT15P19012 456 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 C2orf54Q08AI8 447 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 CLUL1Q15846 466 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 PPP1R21Q6ZMI0 780 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 PEX26Q7Z412 305 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 C2CD5Q86YS7 1000 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 ACRBPQ8NEB7 543 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 KIF2CQ99661 725 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 FUT8Q9BYC5 575 aa11.4□□□□□ -0.58
LIN54-202ENST00000442461 COL17A1Q9UMD9 1497 aaPredicted RBP11.4□□□□□ -0.58
LIN54-202ENST00000442461 EIF4E1BA6NMX2 242 aaKnown RBP11.4□□□□□ -0.59
LIN54-202ENST00000442461 CAND2O75155 1236 aa11.4□□□□□ -0.59
LIN54-202ENST00000442461 ATP1A3P13637 1013 aa11.4□□□□□ -0.59
LIN54-202ENST00000442461 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.59
LIN54-202ENST00000442461 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.59
LIN54-202ENST00000442461 ELAC2Q9BQ52 826 aaKnown RBP11.4□□□□□ -0.59
LIN54-202ENST00000442461 HAUS2Q9NVX0 235 aa11.4□□□□□ -0.59
LIN54-202ENST00000442461 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 G3V3G9 751 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 KRIT1O00522 736 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 DNM2P50570 870 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 PLCD1P51178 756 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 RBL2Q08999 1139 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 KCNV2Q8TDN2 545 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 KRT12Q99456 494 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 CARD14Q9BXL6 1004 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 SLC40A1Q9NP59 571 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 BCAP29Q9UHQ4 241 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 KCNK3O14649 394 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 RNASELQ05823 741 aaKnown RBP11.39□□□□□ -0.59
LIN54-202ENST00000442461 KLC1Q07866 573 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
LIN54-202ENST00000442461 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 OSBPL3Q9H4L5 887 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 SNRKQ9NRH2 765 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 RTEL1Q9NZ71 1219 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 VWA3AA6NCI4 1184 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 ERCC5P28715 1186 aaPredicted RBP11.39□□□□□ -0.59
LIN54-202ENST00000442461 USP14P54578 494 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 MRPS35P82673 323 aaKnown RBP11.39□□□□□ -0.59
LIN54-202ENST00000442461 MAP3K12Q12852 859 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 ZNF827Q17R98 1081 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 HS2ST1Q7LGA3 356 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 FAM227BQ96M60 508 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 EPN3Q9H201 632 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 DPH5Q9H2P9 285 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
LIN54-202ENST00000442461 ARHGAP42A6NI28 874 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 TMEM110-MUSTN1A8MSY1 372 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 VPS41P49754 854 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 SMTNP53814 917 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 BIRC3Q13489 604 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 PTPN21Q16825 1174 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 SYCE1Q8N0S2 351 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 NSMCE1Q8WV22 266 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 NELFBQ8WX92 580 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 AATFQ9NY61 560 aaKnown RBP eCLIP11.38□□□□□ -0.59
LIN54-202ENST00000442461 ASIC3Q9UHC3 531 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 NUP160Q12769 1436 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 KCNJ18B7U540 433 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 MCM7P33993 719 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 PDE6CP51160 858 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 TPD52P55327 224 aaPredicted RBP11.38□□□□□ -0.59
LIN54-202ENST00000442461 KCNJ12Q14500 433 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 TEX9Q8N6V9 391 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 WDR24Q96S15 920 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 CCT8L2Q96SF2 557 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 SEC63Q9UGP8 760 aaKnown RBP11.38□□□□□ -0.59
LIN54-202ENST00000442461 INTUQ9ULD6 942 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
LIN54-202ENST00000442461 H0Y3Z8 333 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 DDIT3P35638 169 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 STAMBPL1Q96FJ0 436 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 CABP5Q9NP86 173 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 ABCC4O15439 1325 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 METTL24Q5JXM2 366 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
LIN54-202ENST00000442461 USP6NLQ92738 828 aa11.38□□□□□ -0.59
LIN54-202ENST00000442461 OLFM3Q96PB7 478 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms