RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
TTC28-203ENST00000442232 ERVK-9P63128 1117 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 ERVK-24P63145 666 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 CCNA1P78396 465 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 TRMT44Q8IYL2 757 aaKnown RBP14.23□□□□□ -0.13
TTC28-203ENST00000442232 C12orf42Q96LP6 360 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
TTC28-203ENST00000442232 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
TTC28-203ENST00000442232 ZSCAN25Q6NSZ9 544 aa14.22□□□□□ -0.13
TTC28-203ENST00000442232 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
TTC28-203ENST00000442232 KIAA1683Q9H0B3 1180 aa14.22□□□□□ -0.13
TTC28-203ENST00000442232 BOLA2Q9H3K6 86 aa14.22□□□□□ -0.13
TTC28-203ENST00000442232 HMX1Q9NP08 348 aaPredicted RBP14.22□□□□□ -0.13
TTC28-203ENST00000442232 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
TTC28-203ENST00000442232 EMILIN3Q9NT22 766 aa14.22□□□□□ -0.13
TTC28-203ENST00000442232 ZKSCAN1P17029 563 aaPredicted RBP14.21□□□□□ -0.13
TTC28-203ENST00000442232 ATP5JP18859 108 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 VCAM1P19320 739 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 CYP2B6P20813 491 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 SHMT1P34896 483 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 RGS2P41220 211 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 PLCD1P51178 756 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 WDR78Q5VTH9 848 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 SIRT2Q8IXJ6 389 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 LCORLQ8N3X6 602 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 SDR42E1Q8WUS8 393 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 SWAP70Q9UH65 585 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
TTC28-203ENST00000442232 RPTORQ8N122 1335 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 TCRBV5S4A2TA0A5A2 114 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 EVI5O60447 810 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 MBD4O95243 580 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 ADD2P35612 726 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 GPR142Q7Z601 462 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 NECAB2Q7Z6G3 386 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 UBE2Q1Q7Z7E8 422 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 ANKLE1Q8NAG6 615 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 HAUS7Q99871 368 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 SH2D4AQ9H788 454 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 ARMT1Q9H993 441 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 DCP1AQ9NPI6 582 aaPredicted RBP14.2□□□□□ -0.14
TTC28-203ENST00000442232 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 GJD2Q9UKL4 321 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 COLQQ9Y215 455 aaPredicted RBP14.2□□□□□ -0.14
TTC28-203ENST00000442232 IVNS1ABPQ9Y6Y0 642 aa14.2□□□□□ -0.14
TTC28-203ENST00000442232 XRCC5P13010 732 aaKnown RBP14.19□□□□□ -0.14
TTC28-203ENST00000442232 SEPT2Q15019 361 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 TMEM179Q6ZVK1 233 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 TRIB2Q92519 343 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 EDC3Q96F86 508 aaKnown RBP14.19□□□□□ -0.14
TTC28-203ENST00000442232 APBA2Q99767 749 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 CRISPLD2Q9H0B8 497 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
TTC28-203ENST00000442232 ARHGEF10LQ9HCE6 1279 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 ATP8A2Q9NTI2 1148 aa14.19□□□□□ -0.14
TTC28-203ENST00000442232 PEX10O60683 326 aa14.18□□□□□ -0.14
TTC28-203ENST00000442232 PRKAR2AP13861 404 aaKnown RBP14.18□□□□□ -0.14
TTC28-203ENST00000442232 GABPAQ06546 454 aa14.18□□□□□ -0.14
TTC28-203ENST00000442232 CATSPERGQ6ZRH7 1159 aa14.18□□□□□ -0.14
TTC28-203ENST00000442232 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
TTC28-203ENST00000442232 PORCNQ9H237 461 aa14.18□□□□□ -0.14
TTC28-203ENST00000442232 CYP2D6P10635 497 aa14.17□□□□□ -0.14
TTC28-203ENST00000442232 TRIM32Q13049 653 aa14.17□□□□□ -0.14
TTC28-203ENST00000442232 UBE3CQ15386 1083 aa14.17□□□□□ -0.14
TTC28-203ENST00000442232 Q3C1V9 767 aa14.17□□□□□ -0.14
TTC28-203ENST00000442232 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
TTC28-203ENST00000442232 PAWRQ96IZ0 340 aaKnown RBP14.17□□□□□ -0.14
TTC28-203ENST00000442232 TRIOBPQ9H2D6 2365 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 ALPK3Q96L96 1907 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
TTC28-203ENST00000442232 ICA1Q05084 483 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 MAP2K5Q13163 448 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 MFSD14CQ5VZR4 134 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 LBX2Q6XYB7 198 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 CCDC17Q96LX7 622 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 NBPF3Q9H094 633 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 ECHDC1Q9NTX5 307 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
TTC28-203ENST00000442232 FRMPD3Q5JV73 1810 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 SLC15A5A6NIM6 579 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 PRKAB2O43741 272 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.14
TTC28-203ENST00000442232 GUCY1A2P33402 732 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 FXR1P51114 621 aaKnown RBP eCLIP14.15□□□□□ -0.14
TTC28-203ENST00000442232 COG2Q14746 738 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 MORN1Q5T089 497 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 SLC44A5Q8NCS7 719 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 LPAR1Q92633 364 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 DYNLL2Q96FJ2 89 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 C11orf49Q9H6J7 331 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 HOXC10Q9NYD6 342 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 ARPP21Q9UBL0 812 aaPredicted RBP14.15□□□□□ -0.14
TTC28-203ENST00000442232 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
TTC28-203ENST00000442232 CNMDO75829 334 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms