RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 EPSTI1Q96J88 318 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 BRMS1Q9HCU9 246 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 PLCH1Q4KWH8 1693 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 PRPF3O43395 683 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 AFMP43652 599 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 CRKLP46109 303 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 TMCO3Q6UWJ1 677 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 IQCA1Q86XH1 822 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 RBM28Q9NW13 759 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-207ENST00000441915 FAM205CA6NFA0 338 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 CAMTA2O94983 1202 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 ATP6V1AP38606 617 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 SHISA4Q96DD7 197 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 A0A0G2JS52 829 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 NTSR2O95665 410 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 SPATA1Q5VX52 437 aa18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 IPO4Q8TEX9 1081 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 SYMPKQ92797 1274 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-207ENST00000441915 AKR1B15C9JRZ8 316 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 EARS2Q5JPH6 523 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 KLHL10Q6JEL2 608 aa18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 WDR24Q96S15 920 aa18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 FHOD1Q9Y613 1164 aa18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 ZNF804BA4D1E1 1349 aa18.77■□□□□ 0.6
SEMA3B-207ENST00000441915 A0A087X0B3 334 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 PRDM1O75626 825 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 CALM1P0DP23 149 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 CALM2P0DP24 149 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 CALM3P0DP25 149 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 MAP3K9P80192 1104 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 FUT2Q10981 343 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 PAGE5Q96GU1 130 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 GSDMAQ96QA5 445 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 SYNRGQ9UMZ2 1314 aa18.77■□□□□ 0.59
SEMA3B-207ENST00000441915 hCG_1642624A0A1W2PR95 340 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 GYG1P46976 350 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 SH3RF1Q7Z6J0 888 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 PANX2Q96RD6 677 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 CTAGE1Q96RT6 745 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 PLEKHA8P1O95397 391 aa18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 PCP11498 1178 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-207ENST00000441915 CCDC175P0C221 793 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 PNMA6AP0CW24 399 aaPredicted RBP18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 STX17P56962 302 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 TROAPQ12815 778 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 PPFIBP1Q86W92 1011 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 DESI2Q9BSY9 194 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 BRIP1Q9BX63 1249 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 BCL9LQ86UU0 1499 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 TEX33O43247 280 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 IGSF22Q8N9C0 903 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 MRFAP1Q9Y605 127 aa18.75■□□□□ 0.59
SEMA3B-207ENST00000441915 ZRANB2O95218 330 aaKnown RBP eCLIP18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 CUL4BQ13620 913 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 FILIP1LQ4L180 1135 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 CAVIN4Q5BKX8 364 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 APTXQ7Z2E3 356 aaKnown RBP18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 CYP2D7A0A087X1C5 515 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 CASP1P29466 404 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 PPP2R3AQ06190 1150 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 DPYDQ12882 1025 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 ZNF174Q15697 407 aa18.74■□□□□ 0.59
SEMA3B-207ENST00000441915 DDAH1O94760 285 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 DYNLL1P63167 89 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 TTC38Q5R3I4 469 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 KIFC2Q96AC6 838 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 DUOX1Q9NRD9 1551 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 PHLPP1O60346 1717 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 DOT1LQ8TEK3 1739 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 LOC102724428A0A0B4J2F2 783 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 SEMA3EO15041 775 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 SIK1P57059 783 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 FAM193AP78312 1265 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 CDKAL1Q5VV42 579 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 GPR161Q8N6U8 529 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 CCDC12Q8WUD4 166 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 ST7Q9NRC1 585 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 SOWAHDA6NJG2 315 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 FGRP09769 529 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 RBL2Q08999 1139 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 PTGDRQ13258 359 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 MTF1Q14872 753 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 KARSQ15046 597 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 TMTC3Q6ZXV5 915 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
SEMA3B-207ENST00000441915 WNT7AO00755 349 aa18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 ATP2C1P98194 919 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms