RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 ACSBG1Q96GR2 724 aa9.44□□□□□ -0.9
EPHA4-208ENST00000441679 NSUN5Q96P11 429 aaKnown RBP9.44□□□□□ -0.9
EPHA4-208ENST00000441679 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
EPHA4-208ENST00000441679 LIN7BQ9HAP6 207 aa9.44□□□□□ -0.9
EPHA4-208ENST00000441679 PTPRCP08575 1304 aa9.44□□□□□ -0.9
EPHA4-208ENST00000441679 KDM6AO15550 1401 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-208ENST00000441679 HEG1Q9ULI3 1381 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 A0A087WZG4 1122 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-208ENST00000441679 BMP4P12644 408 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
EPHA4-208ENST00000441679 GPLD1P80108 840 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 CTBSQ01459 385 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 TAF1CQ15572 869 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-208ENST00000441679 ZKSCAN2Q63HK3 967 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 C8orf58Q8NAV2 365 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 ZNF496Q96IT1 587 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-208ENST00000441679 DDX21Q9NR30 783 aaKnown RBP eCLIP9.43□□□□□ -0.9
EPHA4-208ENST00000441679 SMC4Q9NTJ3 1288 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 ASAP1Q9ULH1 1129 aa9.43□□□□□ -0.9
EPHA4-208ENST00000441679 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 EIF2S2P20042 333 aaKnown RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 SIK1P57059 783 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 SLC39A6Q13433 755 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 COL13A1Q5TAT6 717 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 ZNF468Q5VIY5 522 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 PRPF40BQ6NWY9 871 aaKnown RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 METTL16Q86W50 562 aaKnown RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 FLAD1Q8NFF5 587 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 OSMRQ99650 979 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
EPHA4-208ENST00000441679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-208ENST00000441679 GLI3P10071 1580 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 TRIM37O94972 964 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 APBA3O96018 575 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 XRCC5P13010 732 aaKnown RBP9.41□□□□□ -0.9
EPHA4-208ENST00000441679 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
EPHA4-208ENST00000441679 BAG6P46379 1132 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 FTSJ3Q8IY81 847 aaKnown RBP9.41□□□□□ -0.9
EPHA4-208ENST00000441679 GLIS3Q8NEA6 775 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 IGFLR1Q9H665 355 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 AVENQ9NQS1 362 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-208ENST00000441679 SCN11AQ9UI33 1791 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 THSD7AQ9UPZ6 1657 aa9.41□□□□□ -0.9
EPHA4-208ENST00000441679 MRC1P22897 1456 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 SIN3BO75182 1162 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 GHRHP01286 108 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 MX2P20592 715 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 FCGRTP55899 365 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 TBC1D8BQ0IIM8 1120 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 MEI1Q5TIA1 1274 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 CEP120Q8N960 986 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 TGIF2Q9GZN2 237 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
EPHA4-208ENST00000441679 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-208ENST00000441679 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
EPHA4-208ENST00000441679 NSFL1CQ9UNZ2 370 aaKnown RBP9.4□□□□□ -0.9
EPHA4-208ENST00000441679 SUPT16HQ9Y5B9 1047 aaKnown RBP9.4□□□□□ -0.9
EPHA4-208ENST00000441679 PALLDQ8WX93 1383 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 POTECB2RU33 542 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 KCNQ2O43526 872 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-208ENST00000441679 HSP90AB3PQ58FF7 597 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 ATF7IPQ6VMQ6 1270 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 CCNJLQ8IV13 435 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-208ENST00000441679 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-208ENST00000441679 ZFYVE1Q9HBF4 777 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 DZANK1Q9NVP4 752 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 DNAJB12Q9NXW2 375 aaKnown RBP9.39□□□□□ -0.91
EPHA4-208ENST00000441679 ZNF652Q9Y2D9 606 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
EPHA4-208ENST00000441679 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 KCNQ3O43525 872 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 ACPPP15309 386 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
EPHA4-208ENST00000441679 MLLT1Q03111 559 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-208ENST00000441679 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 NAALADL2Q58DX5 795 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 CNTNAP3BQ96NU0 1288 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 TCF12Q99081 682 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 ABCB6Q9NP58 842 aa9.38□□□□□ -0.91
EPHA4-208ENST00000441679 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms