RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GTF2F1P35269 517 aaKnown RBP eCLIP7.68□□□□□ -1.18
PFDN4-202ENST00000441080 ETFBP38117 255 aa7.68□□□□□ -1.18
PFDN4-202ENST00000441080 FAM169BQ8N8A8 192 aa7.68□□□□□ -1.18
PFDN4-202ENST00000441080 DRC1Q96MC2 740 aa7.68□□□□□ -1.18
PFDN4-202ENST00000441080 METTL22Q9BUU2 404 aaPredicted RBP7.68□□□□□ -1.18
PFDN4-202ENST00000441080 OSBPL1AQ9BXW6 950 aa7.68□□□□□ -1.18
PFDN4-202ENST00000441080 SEMA6BQ9H3T3 888 aa7.68□□□□□ -1.18
PFDN4-202ENST00000441080 TPX2Q9ULW0 747 aaKnown RBP7.68□□□□□ -1.18
PFDN4-202ENST00000441080 FAM86C2PA6NEL3 165 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
PFDN4-202ENST00000441080 EOMESO95936 686 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 ACRP10323 421 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 ETV3P41162 512 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 CHMP4BP1P59074 171 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 PPP2R5EQ16537 467 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 TNNI3KQ59H18 835 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 DUSP27Q5VZP5 1158 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
PFDN4-202ENST00000441080 ZNF746Q6NUN9 644 aaPredicted RBP7.67□□□□□ -1.18
PFDN4-202ENST00000441080 CDH24Q86UP0 819 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 SLC51AQ86UW1 340 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 C19orf47Q8N9M1 422 aaKnown RBP7.67□□□□□ -1.18
PFDN4-202ENST00000441080 DNAJB8Q8NHS0 232 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 RIN3Q8TB24 985 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 PPP1R13LQ8WUF5 828 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 DHX38Q92620 1227 aaKnown RBP7.67□□□□□ -1.18
PFDN4-202ENST00000441080 SLC9A7Q96T83 725 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 PRKAG3Q9UGI9 489 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 CEP131Q9UPN4 1083 aa7.67□□□□□ -1.18
PFDN4-202ENST00000441080 SMAD7O15105 426 aaKnown RBP7.66□□□□□ -1.18
PFDN4-202ENST00000441080 UBOX5O94941 541 aa7.66□□□□□ -1.18
PFDN4-202ENST00000441080 CCNFP41002 786 aa7.66□□□□□ -1.18
PFDN4-202ENST00000441080 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.185e-6■■■■□ 22.5
PFDN4-202ENST00000441080 ARMC5Q96C12 935 aa7.66□□□□□ -1.18
PFDN4-202ENST00000441080 PRDM5Q9NQX1 630 aaPredicted RBP7.66□□□□□ -1.18
PFDN4-202ENST00000441080 GTF2IRD1Q9UHL9 959 aa7.66□□□□□ -1.18
PFDN4-202ENST00000441080 CYP7A1P22680 504 aa7.65□□□□□ -1.18
PFDN4-202ENST00000441080 PRSS36Q5K4E3 855 aa7.65□□□□□ -1.18
PFDN4-202ENST00000441080 TTC6Q86TZ1 520 aa7.65□□□□□ -1.18
PFDN4-202ENST00000441080 ZDHHC13Q8IUH4 622 aa7.65□□□□□ -1.18
PFDN4-202ENST00000441080 SLC12A7Q9Y666 1083 aa7.65□□□□□ -1.18
PFDN4-202ENST00000441080 A0A1W2PQH9 124 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 CASP7P55210 303 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 ZYXQ15942 572 aaKnown RBP7.64□□□□□ -1.19
PFDN4-202ENST00000441080 UNC5AQ6ZN44 842 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 ANKS3Q6ZW76 656 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 CKAP2LQ8IYA6 745 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 SLC6A18Q96N87 628 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.64□□□□□ -1.19
PFDN4-202ENST00000441080 ACTR10Q9NZ32 417 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 MAPK8IP1Q9UQF2 711 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 LEMD3Q9Y2U8 911 aa7.64□□□□□ -1.19
PFDN4-202ENST00000441080 R3HCC1Q9Y3T6 440 aaKnown RBP7.64□□□□□ -1.19
PFDN4-202ENST00000441080 CLEC3AO75596 197 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 SFRP5Q5T4F7 317 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 FAM214BQ7L5A3 538 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 UBXN4Q92575 508 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 DHRS1Q96LJ7 313 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 HEXIM2Q96MH2 286 aaKnown RBP7.63□□□□□ -1.19
PFDN4-202ENST00000441080 KREMEN1Q96MU8 473 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 LRRC4CQ9HCJ2 640 aa7.63□□□□□ -1.19
PFDN4-202ENST00000441080 K7ELQ4 463 aaPredicted RBP7.62□□□□□ -1.19
PFDN4-202ENST00000441080 IGF2BP3O00425 579 aaKnown RBP eCLIP7.62□□□□□ -1.19
PFDN4-202ENST00000441080 ARHGAP27Q6ZUM4 889 aa7.62□□□□□ -1.19
PFDN4-202ENST00000441080 TMEM192Q8IY95 271 aa7.62□□□□□ -1.19
PFDN4-202ENST00000441080 RNF141Q8WVD5 230 aa7.62□□□□□ -1.19
PFDN4-202ENST00000441080 HNRNPLLQ8WVV9 542 aaKnown RBP7.62□□□□□ -1.19
PFDN4-202ENST00000441080 COX4I2Q96KJ9 171 aa7.62□□□□□ -1.19
PFDN4-202ENST00000441080 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
PFDN4-202ENST00000441080 TNKS2Q9H2K2 1166 aa7.62□□□□□ -1.19
PFDN4-202ENST00000441080 PIM2Q9P1W9 311 aa7.62□□□□□ -1.19
PFDN4-202ENST00000441080 CNTNAP4Q9C0A0 1308 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 GNAT3A8MTJ3 354 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 CYP26A1O43174 497 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 CBX7O95931 251 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 TGFB1P01137 390 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 RNF4P78317 190 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 FAM181AQ8N9Y4 354 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 DNAJC2Q99543 621 aaKnown RBP7.61□□□□□ -1.19
PFDN4-202ENST00000441080 ASPNQ9BXN1 380 aa7.61□□□□□ -1.19
PFDN4-202ENST00000441080 PHAXQ9H814 394 aaKnown RBP7.61□□□□□ -1.19
PFDN4-202ENST00000441080 SUCOQ9UBS9 1254 aaKnown RBP7.61□□□□□ -1.19
PFDN4-202ENST00000441080 LTBP3Q9NS15 1303 aa7.6□□□□□ -1.19
PFDN4-202ENST00000441080 PRR19A6NJB7 356 aa7.6□□□□□ -1.19
PFDN4-202ENST00000441080 PMS1P54277 932 aaKnown RBP7.6□□□□□ -1.19
PFDN4-202ENST00000441080 LARP1BQ659C4 914 aaKnown RBP7.6□□□□□ -1.19
PFDN4-202ENST00000441080 ZNF512BQ96KM6 892 aaPredicted RBP7.6□□□□□ -1.19
PFDN4-202ENST00000441080 TRIM55Q9BYV6 548 aa7.6□□□□□ -1.19
PFDN4-202ENST00000441080 MKRN2Q9H000 416 aaKnown RBP7.6□□□□□ -1.19
PFDN4-202ENST00000441080 COL17A1Q9UMD9 1497 aaPredicted RBP7.6□□□□□ -1.19
PFDN4-202ENST00000441080 KLF4O43474 513 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 ZNF865P0CJ78 1059 aaPredicted RBP7.59□□□□□ -1.19
PFDN4-202ENST00000441080 FOSL1P15407 271 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 ITIH2P19823 946 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 KIR3DL1P43629 444 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 OXCT1P55809 520 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 RBL2Q08999 1139 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 BBS9Q3SYG4 887 aa7.59□□□□□ -1.19
PFDN4-202ENST00000441080 NBPF12Q5TAG4 269 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms