RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 TRIM27P14373 513 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 MNX1P50219 401 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 RRP1P56182 461 aaKnown RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 ERVK-9P63128 1117 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 ERVK-24P63145 666 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 SHCBP1Q8NEM2 672 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 PAWRQ96IZ0 340 aaKnown RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 KIAA1683Q9H0B3 1180 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 NRBP1Q9UHY1 535 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 COL6A1P12109 1028 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 MFSD14CQ5VZR4 134 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 TICAM2Q86XR7 235 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 CCAR1Q8IX12 1150 aaKnown RBP7.27□□□□□ -1.25
PTPRR-204ENST00000440835 MB21D1Q8N884 522 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 CHMP4BQ9H444 224 aaKnown RBP7.27□□□□□ -1.25
PTPRR-204ENST00000440835 NAV1Q8NEY1 1877 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 A0A0G2JMZ2 1700 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 STRNO43815 780 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 MYCP01106 439 aaPredicted RBP7.27□□□□□ -1.25
PTPRR-204ENST00000440835 MAP3K12Q12852 859 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 MTMR2Q13614 643 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 SLC5A4Q9NY91 659 aa7.27□□□□□ -1.25
PTPRR-204ENST00000440835 COPB2P35606 906 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 MAP2K5Q13163 448 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 OS9Q13438 667 aaPredicted RBP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 ABRAQ8N0Z2 381 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 TGFBRAP1Q8WUH2 860 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 P2RX7Q99572 595 aaKnown RBP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 HSP90AA1P07900 732 aaKnown RBP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 PRKAR2AP13861 404 aaKnown RBP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 OLFML2BQ68BL8 750 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 CATSPERGQ6ZRH7 1159 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 GPR142Q7Z601 462 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 TDHQ8IZJ6 230 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 TRIB2Q92519 343 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 SH2D4AQ9H788 454 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 CWC22Q9HCG8 908 aaKnown RBP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 AATFQ9NY61 560 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTPRR-204ENST00000440835 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 SWAP70Q9UH65 585 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 SERPINB13Q9UIV8 391 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 STXBP5LQ9Y2K9 1186 aa7.26□□□□□ -1.25
PTPRR-204ENST00000440835 PNMA6EA0A0J9YXQ4 647 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 HOXC10Q9NYD6 342 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.25□□□□□ -1.25
PTPRR-204ENST00000440835 MYO5AQ9Y4I1 1855 aaKnown RBP7.25□□□□□ -1.25
PTPRR-204ENST00000440835 MYH8P13535 1937 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 IGHA2P01877 340 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 CYP7A1P22680 504 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 PTPREP23469 700 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 RRP1BQ14684 758 aaKnown RBP7.25□□□□□ -1.25
PTPRR-204ENST00000440835 TBC1D9Q6ZT07 1266 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 ARRDC4Q8NCT1 418 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 LPAR1Q92633 364 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 EDC3Q96F86 508 aaKnown RBP7.25□□□□□ -1.25
PTPRR-204ENST00000440835 DNAJC18Q9H819 358 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 IVNS1ABPQ9Y6Y0 642 aa7.25□□□□□ -1.25
PTPRR-204ENST00000440835 ROBO3Q96MS0 1386 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 DNM1LO00429 736 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 SURF6O75683 361 aaKnown RBP7.24□□□□□ -1.25
PTPRR-204ENST00000440835 USP5P45974 858 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 CACNB2Q08289 660 aaPredicted RBP7.24□□□□□ -1.25
PTPRR-204ENST00000440835 GRB14Q14449 540 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 ABCB5Q2M3G0 1257 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 CERKLQ49MI3 558 aaPredicted RBP7.24□□□□□ -1.25
PTPRR-204ENST00000440835 LHX8Q68G74 356 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 MAPKAPK5Q8IW41 473 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 C7orf61Q8IZ16 206 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 DBNDD2Q9BQY9 259 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 CRNKL1Q9BZJ0 848 aaKnown RBP7.24□□□□□ -1.25
PTPRR-204ENST00000440835 HTTP42858 3142 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 C1orf53Q5VUE5 145 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 FTSJ3Q8IY81 847 aaKnown RBP7.24□□□□□ -1.25
PTPRR-204ENST00000440835 DDRGK1Q96HY6 314 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 MROH8Q9H579 483 aa7.24□□□□□ -1.25
PTPRR-204ENST00000440835 NCLP19338 710 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 CYP2B6P20813 491 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 PI16Q6UXB8 463 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 SKAP1Q86WV1 359 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 TMEM57Q8N5G2 664 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 CCDC17Q96LX7 622 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 FEZ1Q99689 392 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 STAP2Q9UGK3 403 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 DDX20Q9UHI6 824 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 DBNLQ9UJU6 430 aaKnown RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 PRDM4Q9UKN5 801 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 PALD1Q9ULE6 856 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 TMEM265A0A087WTH1 108 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 RAB11FIP3O75154 756 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 HMMRO75330 724 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 CNMDO75829 334 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 SLC25A27O95847 323 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 GH2P01242 217 aa7.23□□□□□ -1.25
PTPRR-204ENST00000440835 MAGEA10P43363 369 aaPredicted RBP7.23□□□□□ -1.25
PTPRR-204ENST00000440835 ZAP70P43403 619 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms