RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
CHD6-204ENST00000440647 MTFR1LQ9H019 292 aa8.19□□□□□ -1.1
CHD6-204ENST00000440647 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
CHD6-204ENST00000440647 RGPD2P0DJD1 1756 aa8.19□□□□□ -1.1
CHD6-204ENST00000440647 QSER1Q2KHR3 1735 aa8.18□□□□□ -1.1
CHD6-204ENST00000440647 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
CHD6-204ENST00000440647 FSCN2O14926 492 aa8.18□□□□□ -1.1
CHD6-204ENST00000440647 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
CHD6-204ENST00000440647 CABP4P57796 275 aa8.18□□□□□ -1.1
CHD6-204ENST00000440647 PEAR1Q5VY43 1037 aaPredicted RBP8.18□□□□□ -1.1
CHD6-204ENST00000440647 SLC51AQ86UW1 340 aa8.18□□□□□ -1.1
CHD6-204ENST00000440647 IP6K1Q92551 441 aa8.18□□□□□ -1.1
CHD6-204ENST00000440647 PDGFDQ9GZP0 370 aaPredicted RBP8.18□□□□□ -1.1
CHD6-204ENST00000440647 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
CHD6-204ENST00000440647 H3BRJ5 948 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 TM4SF5O14894 197 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 NOS3P29474 1203 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 CD68P34810 354 aaPredicted RBP8.17□□□□□ -1.1
CHD6-204ENST00000440647 TMF1P82094 1093 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 FOXD4L6Q3SYB3 417 aaPredicted RBP8.17□□□□□ -1.1
CHD6-204ENST00000440647 FOXD4L3Q6VB84 417 aaPredicted RBP8.17□□□□□ -1.1
CHD6-204ENST00000440647 GALNT12Q8IXK2 581 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 KLHL23Q8NBE8 558 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 WNT8BQ93098 351 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 SYTL4Q96C24 671 aaPredicted RBP8.17□□□□□ -1.1
CHD6-204ENST00000440647 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
CHD6-204ENST00000440647 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 ANKRD36BQ8N2N9 1353 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
CHD6-204ENST00000440647 RTL1A6NKG5 1358 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 LY75O60449 1722 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 IGHA2P01877 340 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 POLR3DP05423 398 aaPredicted RBP8.16□□□□□ -1.1
CHD6-204ENST00000440647 HOXC9P31274 260 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 LRP8Q14114 963 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 MAP3K19Q56UN5 1328 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 BSNDQ8WZ55 320 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 TUBGCP6Q96RT7 1819 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 RBCK1Q9BYM8 510 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
CHD6-204ENST00000440647 AKTIPQ9H8T0 292 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 LATS2Q9NRM7 1088 aa8.16□□□□□ -1.1
CHD6-204ENST00000440647 BIN2Q9UBW5 565 aaPredicted RBP8.16□□□□□ -1.1
CHD6-204ENST00000440647 USP47Q96K76 1375 aa8.15□□□□□ -1.1
CHD6-204ENST00000440647 F8W735 103 aaPredicted RBP8.15□□□□□ -1.1
CHD6-204ENST00000440647 KLHDC7BQ96G42 594 aa8.15□□□□□ -1.1
CHD6-204ENST00000440647 TESK2Q96S53 571 aa8.15□□□□□ -1.1
CHD6-204ENST00000440647 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
CHD6-204ENST00000440647 OSGEPQ9NPF4 335 aa8.15□□□□□ -1.1
CHD6-204ENST00000440647 CHD4Q14839 1912 aa8.15□□□□□ -1.11
CHD6-204ENST00000440647 MEGF6O75095 1541 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 CPNE3O75131 537 aaKnown RBP8.14□□□□□ -1.11
CHD6-204ENST00000440647 ALX3O95076 343 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 POLD1P28340 1107 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 KCNA1Q09470 495 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 ORC1Q13415 861 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 RRS1Q15050 365 aaKnown RBP8.14□□□□□ -1.11
CHD6-204ENST00000440647 ZNF827Q17R98 1081 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 USPL1Q5W0Q7 1092 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 ZCRB1Q8TBF4 217 aaKnown RBP8.14□□□□□ -1.11
CHD6-204ENST00000440647 RAPGEF4Q8WZA2 1011 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 DMRTB1Q96MA1 342 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 SYT17Q9BSW7 474 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 NIF3L1Q9GZT8 377 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 KCNK4Q9NYG8 393 aa8.14□□□□□ -1.11
CHD6-204ENST00000440647 CGNL1Q0VF96 1302 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 A0A1W2PP55 124 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 GPR182O15218 404 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 IGSF3O75054 1194 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 FBLN1P23142 703 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 ARL4DP49703 201 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.13□□□□□ -1.11
CHD6-204ENST00000440647 VN1R5Q7Z5H4 357 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 ASAP3Q8TDY4 903 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 ALKBH8Q96BT7 664 aaKnown RBP8.13□□□□□ -1.11
CHD6-204ENST00000440647 MEGF10Q96KG7 1140 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 DNAJC25Q9H1X3 360 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 TFCP2L1Q9NZI6 479 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 DCTN4Q9UJW0 460 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 C5P01031 1676 aa8.13□□□□□ -1.11
CHD6-204ENST00000440647 FLT4P35916 1363 aa8.12□□□□□ -1.11
CHD6-204ENST00000440647 SOX1O00570 391 aaPredicted RBP8.12□□□□□ -1.11
CHD6-204ENST00000440647 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
CHD6-204ENST00000440647 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
CHD6-204ENST00000440647 USHBP1Q8N6Y0 703 aa8.12□□□□□ -1.11
CHD6-204ENST00000440647 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
CHD6-204ENST00000440647 IVNS1ABPQ9Y6Y0 642 aa8.12□□□□□ -1.11
CHD6-204ENST00000440647 MAP3K5Q99683 1374 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 PCDH11XQ9BZA7 1347 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 PCDH11YQ9BZA8 1340 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 EIF1AYO14602 144 aaKnown RBP8.11□□□□□ -1.11
CHD6-204ENST00000440647 FYB1O15117 783 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
CHD6-204ENST00000440647 HYAL3O43820 417 aaPredicted RBP8.11□□□□□ -1.11
CHD6-204ENST00000440647 C19orf57Q0VDD7 668 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 IKBKEQ14164 716 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 GPR162Q16538 588 aa8.11□□□□□ -1.11
CHD6-204ENST00000440647 DUOXA2Q1HG44 320 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms