RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PUS7LQ9H0K6 701 aaKnown RBP23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 ZFYP08048 801 aaPredicted RBP23.84■■□□□ 1.41
SHROOM1-204ENST00000440118 MTFR1Q15390 333 aa23.84■■□□□ 1.41
SHROOM1-204ENST00000440118 GPRC5AQ8NFJ5 357 aa23.84■■□□□ 1.41
SHROOM1-204ENST00000440118 ACER1Q8TDN7 264 aa23.84■■□□□ 1.41
SHROOM1-204ENST00000440118 DYNLL2Q96FJ2 89 aa23.84■■□□□ 1.41
SHROOM1-204ENST00000440118 KIAA1683Q9H0B3 1180 aa23.84■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L15C9J2P7 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L13C9JLJ4 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L12C9JPN9 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L11C9JVI0 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L21D6R901 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L18D6R9N7 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L22D6RA61 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L17D6RBQ6 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L19D6RCP7 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L20D6RJB6 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 RNF113AO15541 343 aaKnown RBP23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 GLRX3O76003 335 aaKnown RBP23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 ELNP15502 786 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 MX1P20591 662 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 USP17L24Q0WX57 530 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 TMEM179Q6ZVK1 233 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 APPBP2Q92624 585 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 C12orf42Q96LP6 360 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 FSD1Q9BTV5 496 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 ARPP21Q9UBL0 812 aaPredicted RBP23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 MORF4L1Q9UBU8 362 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 BRCA2P51587 3418 aa23.83■■□□□ 1.41
SHROOM1-204ENST00000440118 CYP2D7A0A087X1C5 515 aa23.82■■□□□ 1.4
SHROOM1-204ENST00000440118 VCAM1P19320 739 aa23.82■■□□□ 1.4
SHROOM1-204ENST00000440118 ANKRD45Q5TZF3 282 aa23.82■■□□□ 1.4
SHROOM1-204ENST00000440118 RNF208Q9H0X6 261 aa23.82■■□□□ 1.4
SHROOM1-204ENST00000440118 CCL5P13501 91 aa23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 IRF5Q13568 498 aa23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 C12orf60Q5U649 245 aa23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 PRPF38BQ5VTL8 546 aaKnown RBP23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 NKX2-3Q8TAU0 364 aa23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 OTUD7AQ8TE49 926 aaPredicted RBP23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 ARHGEF10LQ9HCE6 1279 aa23.81■■□□□ 1.4
SHROOM1-204ENST00000440118 INHAP05111 366 aa23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 GUCY1A2P33402 732 aa23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 ICA1Q05084 483 aa23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 PXYLP1Q8TE99 480 aa23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 GCC1Q96CN9 775 aa23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 RPAP3Q9H6T3 665 aaPredicted RBP23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 SH2D4AQ9H788 454 aa23.8■■□□□ 1.4
SHROOM1-204ENST00000440118 GPAA1O43292 621 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 APPP05067 770 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 AKR1B1P15121 316 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 TDO2P48775 406 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 CDK8P49336 464 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 ERVK-9P63128 1117 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 ERVK-24P63145 666 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 CCDC17Q96LX7 622 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 STRBPQ96SI9 672 aaKnown RBP23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 TANGO6Q9C0B7 1094 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 TXNRD2Q9NNW7 524 aa23.79■■□□□ 1.4
SHROOM1-204ENST00000440118 PEX10O60683 326 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 GNAT2P19087 354 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 MAPK4P31152 587 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 CCNA1P78396 465 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 ATP2B2Q01814 1243 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 AAMPQ13685 434 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 WDR78Q5VTH9 848 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 CTR9Q6PD62 1173 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 C16orf86Q6ZW13 317 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 PI4K2BQ8TCG2 481 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 OSBP2Q969R2 916 aa23.78■■□□□ 1.4
SHROOM1-204ENST00000440118 MINDY4BA8MYZ0 360 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 HDAC1Q13547 482 aaPredicted RBP23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 CLEC10AQ8IUN9 316 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 STK11IPQ8N1F8 1099 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 SOCS4Q8WXH5 440 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 UNC93B1Q9H1C4 597 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 RBPJLQ9UBG7 517 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 PLXNB2O15031 1838 aa23.77■■□□□ 1.4
SHROOM1-204ENST00000440118 M0R2C6 588 aa23.76■■□□□ 1.39
SHROOM1-204ENST00000440118 GJB1P08034 283 aa23.76■■□□□ 1.39
SHROOM1-204ENST00000440118 CATSPERGQ6ZRH7 1159 aa23.76■■□□□ 1.39
SHROOM1-204ENST00000440118 NUDT12Q9BQG2 462 aa23.76■■□□□ 1.39
SHROOM1-204ENST00000440118 MKI67P46013 3256 aaKnown RBP23.76■■□□□ 1.39
SHROOM1-204ENST00000440118 RAD21O60216 631 aa23.75■■□□□ 1.39
SHROOM1-204ENST00000440118 HMGCRP04035 888 aa23.75■■□□□ 1.39
SHROOM1-204ENST00000440118 GIMAP6Q6P9H5 292 aa23.75■■□□□ 1.39
SHROOM1-204ENST00000440118 NACAP1Q9BZK3 213 aa23.75■■□□□ 1.39
SHROOM1-204ENST00000440118 MKNK2Q9HBH9 465 aa23.75■■□□□ 1.39
SHROOM1-204ENST00000440118 RABGAP1Q9Y3P9 1069 aa23.75■■□□□ 1.39
SHROOM1-204ENST00000440118 A0A1W2PRG0 241 aa23.74■■□□□ 1.39
SHROOM1-204ENST00000440118 GSG1L2A8MUP6 293 aa23.74■■□□□ 1.39
SHROOM1-204ENST00000440118 SMIM22K7EJ46 135 aa23.74■■□□□ 1.39
SHROOM1-204ENST00000440118 CYP2B6P20813 491 aa23.74■■□□□ 1.39
SHROOM1-204ENST00000440118 LPAR1Q92633 364 aa23.74■■□□□ 1.39
SHROOM1-204ENST00000440118 GJA8P48165 433 aa23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 SAMD1Q6SPF0 538 aaPredicted RBP23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 PLEKHH3Q7Z736 793 aa23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 SPICE1Q8N0Z3 855 aa23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 U2AF1L4Q8WU68 220 aaKnown RBP23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 PORCNQ9H237 461 aa23.73■■□□□ 1.39
SHROOM1-204ENST00000440118 RWDD1Q9H446 243 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms