RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 GH2P01242 217 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CYP21A2P08686 494 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CDK8P49336 464 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 IMMTQ16891 758 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ROBO3Q96MS0 1386 aa17.12■□□□□ 0.33
TNFRSF1A-204ENST00000440083 AKR1B1P15121 316 aa17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PPATQ06203 517 aa17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 C16orf86Q6ZW13 317 aa17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 BRI3BPQ8WY22 251 aa17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 WBP1LQ9NX94 342 aa17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CCL15-CCL14A0A0B4J2E2 113 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 IGF2BP3O00425 579 aaKnown RBP eCLIP17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PRDM1O75626 825 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CTDSPL2Q05D32 466 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PPARAQ07869 468 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CCL15Q16663 113 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PTPN18Q99952 460 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
TNFRSF1A-204ENST00000440083 PTPRFP10586 1907 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 DDX11L8A8MPP1 907 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 FGAP02671 866 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 GUCY1A2P33402 732 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 FGD1P98174 961 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 MAP2K1Q02750 393 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 DGKZQ13574 1117 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ALX1Q15699 326 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 ABCB5Q2M3G0 1257 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 TAF6LQ9Y6J9 622 aa17.09■□□□□ 0.33
TNFRSF1A-204ENST00000440083 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 FOXN1O15353 648 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ASNSP08243 561 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TM4SF4P48230 202 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 GTF2A2P52657 109 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 HAND2P61296 217 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SREBF2Q12772 1141 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 MOGSQ13724 837 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SEPT2Q15019 361 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 RNF186Q9NXI6 227 aa17.08■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 E7EWF7 191 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ZNF213O14771 459 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 RASA1P20936 1047 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 PTMSP20962 102 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 MCM4P33991 863 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SPP2Q13103 211 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TCEANC2Q96MN5 208 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ZMYM6O95789 1325 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TRPA1O75762 1119 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 CETPP11597 493 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 MTMR2Q13614 643 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 CCDC83Q8IWF9 413 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ACER1Q8TDN7 264 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 LARP6Q9BRS8 491 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 R3HDMLQ9H3Y0 253 aa17.06■□□□□ 0.32
TNFRSF1A-204ENST00000440083 BTBD19C9JJ37 291 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 CXCL11O14625 94 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 LARGE1O95461 756 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 HMGCS2P54868 508 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 Q6ZUG5 572 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 BEGAINQ9BUH8 593 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 WDR18Q9BV38 432 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 CABP5Q9NP86 173 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 GINM1Q9NU53 330 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
TNFRSF1A-204ENST00000440083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms